Pairwise Alignments

Query, 147 a.a., LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) from Variovorax sp. SCN45

Subject, 180 a.a., Ribosomal large subunit pseudouridine synthase E from Alteromonas macleodii MIT1002

 Score = 84.0 bits (206), Expect = 1e-21
 Identities = 49/147 (33%), Positives = 74/147 (50%), Gaps = 14/147 (9%)

Query: 3   DGAPLPWLAPVGRLDKASEGLLLFCNDPQWAARITDPELGPDKTYRVQVDAIPDEAQLRA 62
           D   +P +   GRLD+ SEGLL+  ND +   ++ +P+    KTY VQV+ I DE  ++A
Sbjct: 31  DYIDVPGVYAAGRLDRDSEGLLVLTNDGKLQHKLANPKAKTSKTYWVQVEGIMDEKAMQA 90

Query: 63  LEAGVDDDGERLRAKSVRLL--------------RSGEKNAWLEIVLDEGRNRQIRRLLA 108
           L  GV+      R   V+ +              R     +W+EI + EGRNRQ+RR+ A
Sbjct: 91  LRDGVELKDGMTRPAKVKAMEAPGVWPRNPPVRFRQSIPTSWVEITITEGRNRQVRRMTA 150

Query: 109 AFGLETLLLVRVAIGELPLGELPKGQW 135
             G  TL L+R  +G   +  +  G +
Sbjct: 151 HVGYPTLRLIRYRVGNWTIDGIDNGSY 177