Pairwise Alignments

Query, 355 a.a., Alkanesulfonates transport system permease protein from Variovorax sp. SCN45

Subject, 283 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 61/240 (25%), Positives = 114/240 (47%), Gaps = 9/240 (3%)

Query: 117 VVLALWETFTAKLGLLPSPFFAPPQSLIDVVHEDW-----QRLGLSTAYSLRLLANGFVL 171
           ++L LW+T      +   P F P    + VV   W     Q+L      S+ ++   F+ 
Sbjct: 45  IILVLWQTAATYKWI--DPVFLPAP--LTVVTAFWKMLTKQKLAFDFLASINIVGQAFIY 100

Query: 172 GALVGFGTGVAVGWSRIAGYWVHPLLRFLGPVPASALLPLAFFFAPSSYSAAVFLVGLAT 231
           G+      G+A G SR    +  P    +  +P  A LPL   +      A + ++  + 
Sbjct: 101 GSAAALLLGIAAGLSRKVEEFFGPTFDTIRHIPGIAWLPLIVLWLGIGAPAKILVIAKSV 160

Query: 232 FFPVAVLTWSGVASVGKSYYDVARTLGASERFLVLRVAIPAALPQVFVGLFMGLGASFSV 291
           FFPV + T  G+ +V K+Y ++A+ L  +   L+ +V +PAA+P + V L    G ++++
Sbjct: 161 FFPVFLNTLQGIRNVEKNYIELAKVLTLTRWQLIRKVILPAAMPSIMVSLRYAAGLAWAL 220

Query: 292 LITAEMMGVKAGLGWYLQWAQGWAAYANMYAALFVMAVLCSGLITLLFKVRDRVLSWQKG 351
           ++ AE +    GLG+ +  AQG      +   + ++ ++   +   +F  + RVL W++G
Sbjct: 221 VVVAEGLSGLEGLGFLIFRAQGLLLTDQLLVCMVIIGLVGFAIDRSMFLAQKRVLKWKQG 280