Pairwise Alignments

Query, 355 a.a., Alkanesulfonates transport system permease protein from Variovorax sp. SCN45

Subject, 293 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score =  105 bits (262), Expect = 1e-27
 Identities = 80/259 (30%), Positives = 117/259 (45%), Gaps = 13/259 (5%)

Query: 95  GARAGRLAQALRPAGQWLVALAVVLALWETFTAKLGLLPSPFFAPPQSLIDVVHEDWQRL 154
           GARA  + +AL P   W + L V LALW+   A LG L S     P    DV    W+ L
Sbjct: 31  GARAAAVGRALLP---WALPLGV-LALWQA-AASLGFLSSRVLPAPS---DVAVAFWRTL 82

Query: 155 G-----LSTAYSLRLLANGFVLGALVGFGTGVAVGWSRIAGYWVHPLLRFLGPVPASALL 209
           G      + A S R    G  +G  +GF  GV  G  R A       ++ L  VP  A++
Sbjct: 83  GDGSLLANVAVSTRRALIGLAIGGSIGFALGVLNGIVRPAETAFDSTMQMLRNVPHLAII 142

Query: 210 PLAFFFAPSSYSAAVFLVGLATFFPVAVLTWSGVASVGKSYYDVARTLGASERFLVLRVA 269
           PL   +      A +FLV +   FP+ + T+ G+ +V +   ++AR  G S   L  R+ 
Sbjct: 143 PLVILWFGIGEEAKIFLVAIGVAFPIYLNTFHGIRTVDRGLVEMARVYGLSSTALFWRIV 202

Query: 270 IPAALPQVFVGLFMGLGASFSVLITAEMMGVKAGLGWYLQWAQGWAAYANMYAALFVMAV 329
           +P ALP V VGL   LG  +  LI AE +    G+G+    A+ +     +   +   A+
Sbjct: 203 LPGALPSVLVGLRYALGIMWLTLIVAETISSTEGIGYMTMNAREFLQTDVVVLGVLAYAL 262

Query: 330 LCSGLITLLFKVRDRVLSW 348
           L     +    +  R L+W
Sbjct: 263 LGKLADSFTRAIERRALAW 281