Pairwise Alignments

Query, 355 a.a., Alkanesulfonates transport system permease protein from Variovorax sp. SCN45

Subject, 256 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score =  110 bits (275), Expect = 4e-29
 Identities = 71/244 (29%), Positives = 117/244 (47%), Gaps = 11/244 (4%)

Query: 112 LVALAVVLALWETFTAKLGLLPSPFFAPPQSLIDVVH------EDWQRLGLSTAYSLRLL 165
           L+    +L LWE   A++GL+ + FF PP S++          E W  L      SLR L
Sbjct: 15  LLTPLALLGLWEA-AARMGLVDARFFPPPSSIVHTFGALVASGELWTNL----LASLRRL 69

Query: 166 ANGFVLGALVGFGTGVAVGWSRIAGYWVHPLLRFLGPVPASALLPLAFFFAPSSYSAAVF 225
             G +LG +     G+A+G S+     + PL+    P+P SA+LPL          + V 
Sbjct: 70  FLGMLLGGVPALFLGLAMGISKPLRAAIDPLISATYPIPKSAILPLVLLIFGLGEMSKVV 129

Query: 226 LVGLATFFPVAVLTWSGVASVGKSYYDVARTLGASERFLVLRVAIPAALPQVFVGLFMGL 285
           +V L  F+P+ + T  GVA++ K Y DV     AS   +   +A+P ALP +  G+ + +
Sbjct: 130 MVALGAFYPILINTVMGVANIDKIYLDVGHNYRASRWQVFRTIALPGALPSIMAGVKLAM 189

Query: 286 GASFSVLITAEMMGVKAGLGWYLQWAQGWAAYANMYAALFVMAVLCSGLITLLFKVRDRV 345
           G    ++  +EM+    G+G+ +  A        MY  L V+A+L      +L ++   +
Sbjct: 190 GMGLILIAISEMVAASDGIGYMIWNAWQVLTVDTMYVGLLVIALLGFVFSVILDEIERML 249

Query: 346 LSWQ 349
           + W+
Sbjct: 250 IPWK 253