Pairwise Alignments

Query, 355 a.a., Alkanesulfonates transport system permease protein from Variovorax sp. SCN45

Subject, 329 a.a., sulfonate ABC transporter permease from Pseudomonas simiae WCS417

 Score =  395 bits (1015), Expect = e-115
 Identities = 193/312 (61%), Positives = 234/312 (75%), Gaps = 3/312 (0%)

Query: 44  GLLAAAAWVALGLLTLLWPNKEVGFSDWAFTREFGVAALVVAALLLAVSVLGARAGRLAQ 103
           G+    AW+A+ LL   WPN      +W  T+      + +A L + +S+LG    +L Q
Sbjct: 21  GVAVVGAWLAVALLISFWPNAT---RNWPMTQGLANLCVGIAGLYVVLSLLGRTVSKLGQ 77

Query: 104 ALRPAGQWLVALAVVLALWETFTAKLGLLPSPFFAPPQSLIDVVHEDWQRLGLSTAYSLR 163
            LR AG WL+AL V+L  WE  TAKL LLP PFFAPPQ+L+ V  ED+ RL  S  +S  
Sbjct: 78  RLRNAGPWLIALPVLLGGWELLTAKLALLPVPFFAPPQALLAVYIEDYARLADSLLHSAL 137

Query: 164 LLANGFVLGALVGFGTGVAVGWSRIAGYWVHPLLRFLGPVPASALLPLAFFFAPSSYSAA 223
           LL +G  LG + GF  GVA+GWS   GYW+HP+LR LGPVP++ALLPL FF  PSS+SA+
Sbjct: 138 LLGSGVALGTITGFIAGVAIGWSTRIGYWLHPVLRILGPVPSTALLPLCFFLFPSSWSAS 197

Query: 224 VFLVGLATFFPVAVLTWSGVASVGKSYYDVARTLGASERFLVLRVAIPAALPQVFVGLFM 283
           VFL+ LAT+FPV VLTWSGVASV K+YYDVARTLGA + FL+ +VAIPAALP VFVGLFM
Sbjct: 198 VFLIALATWFPVTVLTWSGVASVDKAYYDVARTLGAKQGFLIFKVAIPAALPHVFVGLFM 257

Query: 284 GLGASFSVLITAEMMGVKAGLGWYLQWAQGWAAYANMYAALFVMAVLCSGLITLLFKVRD 343
           GLGASFS L+ AEMMGVK+G+GWYLQWAQGWAAYANMYAAL +MA+ CSGLIT LF VRD
Sbjct: 258 GLGASFSTLVVAEMMGVKSGIGWYLQWAQGWAAYANMYAALLIMALACSGLITGLFLVRD 317

Query: 344 RVLSWQKGTVKW 355
           R+L+WQKG++KW
Sbjct: 318 RLLAWQKGSMKW 329