Pairwise Alignments

Query, 355 a.a., Alkanesulfonates transport system permease protein from Variovorax sp. SCN45

Subject, 273 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score = 89.0 bits (219), Expect = 1e-22
 Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 3/239 (1%)

Query: 113 VALAVVLALWETFTAKLGLLPSPFFAPPQSLIDVVHEDWQRLGL--STAYSLRLLANGFV 170
           + L V++ L      ++G LPS +  P  S I V   D     L    + SL  +  GF 
Sbjct: 28  LVLPVLILLVLEVVVRVGWLPS-YQMPAPSEIAVTLTDLAEGSLWKHISASLGRVLLGFA 86

Query: 171 LGALVGFGTGVAVGWSRIAGYWVHPLLRFLGPVPASALLPLAFFFAPSSYSAAVFLVGLA 230
           +GA +       VG SR A  ++ P    L  +P+ A +PL   +     ++ + L+ + 
Sbjct: 87  IGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIDETSKIVLIAIG 146

Query: 231 TFFPVAVLTWSGVASVGKSYYDVARTLGASERFLVLRVAIPAALPQVFVGLFMGLGASFS 290
            FFPV +   + +  + +   +V +  G S   LV R+ +PAALP +F GL  GL  ++ 
Sbjct: 147 AFFPVYLNGVAAIRDIDRKLVEVGQMYGFSRWRLVRRILLPAALPGLFTGLRSGLSLAWM 206

Query: 291 VLITAEMMGVKAGLGWYLQWAQGWAAYANMYAALFVMAVLCSGLITLLFKVRDRVLSWQ 349
            L+ AE++    GLG+ L   +  +    + AA+ V+A L      LL  +  R L+W+
Sbjct: 207 FLVAAELIAATKGLGYLLSDGRETSRPDIVLAAIIVLASLGKVSDGLLATLEKRCLAWR 265