Pairwise Alignments

Query, 355 a.a., Alkanesulfonates transport system permease protein from Variovorax sp. SCN45

Subject, 275 a.a., ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

 Score =  121 bits (304), Expect = 2e-32
 Identities = 80/257 (31%), Positives = 132/257 (51%), Gaps = 6/257 (2%)

Query: 100 RLAQALRPAGQWL---VALAVVLALWETFTAKLGLLPSPFFAPPQSLIDVVHE--DWQRL 154
           RL + +R AG+W    + + + L LWE    +LG++   + +PP +++  + +  D   L
Sbjct: 15  RLLRIVRGAGRWAERGIGIVLFLLLWEALP-RLGIVSDAYLSPPSAVLAAIGQLLDNGLL 73

Query: 155 GLSTAYSLRLLANGFVLGALVGFGTGVAVGWSRIAGYWVHPLLRFLGPVPASALLPLAFF 214
               A SL+    G VL +  G   G+ +G  R     V PLL+      A AL P+   
Sbjct: 74  WKHVAASLQRSLWGLVLASAAGVVLGLLIGGFRRLAAIVDPLLQLFRQTSAFALFPVFIL 133

Query: 215 FAPSSYSAAVFLVGLATFFPVAVLTWSGVASVGKSYYDVARTLGASERFLVLRVAIPAAL 274
           F      + V ++  A+F+PV + T SGV  V +   + A ++GAS RF+  +V +PA+L
Sbjct: 134 FLGIGELSKVAIIFWASFWPVLLSTVSGVKQVDRLLVNSALSMGASRRFIFFKVVLPASL 193

Query: 275 PQVFVGLFMGLGASFSVLITAEMMGVKAGLGWYLQWAQGWAAYANMYAALFVMAVLCSGL 334
           P +F G+ +    S + L+ AEM+G  +GLG+    +Q       MYA + ++AVL   L
Sbjct: 194 PSIFTGVRLAGAYSITALVAAEMIGAHSGLGFLTLNSQETFQIPTMYAGILMLAVLGLLL 253

Query: 335 ITLLFKVRDRVLSWQKG 351
             LL  +   +L W++G
Sbjct: 254 NYLLALLERHLLRWRRG 270