Pairwise Alignments

Query, 355 a.a., Alkanesulfonates transport system permease protein from Variovorax sp. SCN45

Subject, 260 a.a., putative Nitrate ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  114 bits (284), Expect = 4e-30
 Identities = 79/252 (31%), Positives = 123/252 (48%), Gaps = 14/252 (5%)

Query: 110 QWLVALAVVLA---LWETFT---AKLGLLPSPFFAPPQSLIDVVHEDWQRLGLSTAY--- 160
           +W V LA +LA    W+        LGLL   +   P++++D     WQ L  ST     
Sbjct: 7   RWPVRLASLLACLLFWQVAANVKMDLGLLTFTYVPTPKAVLDAA---WQLLTSSTLLAHL 63

Query: 161 --SLRLLANGFVLGALVGFGTGVAVGWSRIAGYWVHPLLRFLGPVPASALLPLAFFFAPS 218
             SL  +  G+   ALVG   G+ +G S+ A   + P L  L P+PA A +PLA    PS
Sbjct: 64  GSSLARVFAGYATAALVGVALGLLIGRSKWAEDTLLPPLEVLRPIPAVAWIPLAILMFPS 123

Query: 219 SYSAAVFLVGLATFFPVAVLTWSGVASVGKSYYDVARTLGASERFLVLRVAIPAALPQVF 278
           S  + VF+      FP+ + T  GV +V       AR+LGA    ++  V +P ALP + 
Sbjct: 124 SELSMVFITFTGALFPILLNTVHGVEAVDPRLVASARSLGAGRWAILREVVLPGALPSIV 183

Query: 279 VGLFMGLGASFSVLITAEMMGVKAGLGWYLQWAQGWAAYANMYAALFVMAVLCSGLITLL 338
            GL +G+G S+  L+TAEM+  + G+G+Y   +     Y ++   + ++ VL  G   L+
Sbjct: 184 TGLAIGMGTSWFCLVTAEMISGQFGIGYYTWESYTLQNYPDIVVGMLLIGVLGMGSSALV 243

Query: 339 FKVRDRVLSWQK 350
            ++      W +
Sbjct: 244 KRLGALATPWYR 255