Pairwise Alignments

Query, 355 a.a., Alkanesulfonates transport system permease protein from Variovorax sp. SCN45

Subject, 266 a.a., ABC transporter, membrane spanning protein (nitrate/sulfonate) from Agrobacterium fabrum C58

 Score = 85.1 bits (209), Expect = 2e-21
 Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 22/218 (10%)

Query: 98  AGR-LAQALRPAGQWLVALAVVLALWETFTA----KLGLLPSPFFAPPQSLIDVVHEDWQ 152
           AGR LAQA  P   W   + VV+ LW+  ++      G+LPSP        + V+   W 
Sbjct: 12  AGRYLAQAFAP---WAFPVIVVI-LWQIASSGGLLSQGILPSP--------LAVLEAAWS 59

Query: 153 -----RLGLSTAYSLRLLANGFVLGALVGFGTGVAVGWSRIAGYWVHPLLRFLGPVPASA 207
                 L    A S    A GF +G+ +G   G   G  R         L+ L  +P+ A
Sbjct: 60  LAASGELVQHMAASFWRAAVGFGIGSALGLFFGFVNGLWRTGETLFDSSLQMLRNIPSLA 119

Query: 208 LLPLAFFFAPSSYSAAVFLVGLATFFPVAVLTWSGVASVGKSYYDVARTLGASERFLVLR 267
           ++PL   +      A +FLV  AT FP+ + T+ G+ SV +   ++ R  G +   LV  
Sbjct: 120 MVPLVIMWFGIGEEAKIFLVAFATMFPIYLNTFHGIKSVDQGLIEMGRNYGLTRTGLVRD 179

Query: 268 VAIPAALPQVFVGLFMGLGASFSVLITAEMMGVKAGLG 305
           V +P A+  + VG+   LG ++ VLI AE +   +G+G
Sbjct: 180 VILPGAMSSILVGVRYALGVAWIVLIVAETIAASSGIG 217