Pairwise Alignments

Query, 233 a.a., DNA recombination and repair protein RecF from Variovorax sp. SCN45

Subject, 367 a.a., recombinase RecF from Pseudomonas simiae WCS417

 Score =  141 bits (355), Expect = 2e-38
 Identities = 85/234 (36%), Positives = 125/234 (53%), Gaps = 10/234 (4%)

Query: 1   MHVTRLDARGLRRFADVSLLPAPGINLITGENGAGKTSLLEALHLMAYGRSFRGRVRDGL 60
           M ++R+    +R    V+L P+P IN++ G NG+GKTS+LEA+HL+   RSFR      +
Sbjct: 1   MSLSRVSVTAVRNLHPVTLSPSPRINILHGANGSGKTSVLEAIHLLGLARSFRSARLLPV 60

Query: 61  IRAGDPALEVFVEWQEARRDQRRKAGLRHSGHDWAGRLDGASVSQLGELCAALAVVSFEP 120
           I+    A  VF + + A          R  G ++  R+DG +     +L   L +    P
Sbjct: 61  IQYEQLACTVFGQVELAEGGHSSLGISRDRGGEFQIRIDGQNARSAAQLAEILPLQLINP 120

Query: 121 GSHALITGPGEIRRRYLDWGLFHVEPDFTPLWRRYTRALKQRNALLKARARDGQLD---- 176
            S  L+ G  +IRR++LDWG+FHVEP F   W+R  +AL+QRN+ L    R G LD    
Sbjct: 121 DSFRLLEGAPKIRRQFLDWGVFHVEPRFMATWQRLQKALRQRNSWL----RHGTLDAASQ 176

Query: 177 -AWDRELSDAGEPLSRRRQQYLDELQPRFAAFAAELAPGLGAIRLDYVPGWRRD 229
            AWDREL  A + +   R+ Y+  L+P F    +EL   L  + L Y  GW ++
Sbjct: 177 AAWDRELCLASDEIDEYRRAYIKALKPVFEQTLSELLE-LEGLTLSYYRGWDKE 229