Pairwise Alignments

Query, 632 a.a., Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB from Variovorax sp. SCN45

Subject, 557 a.a., Type II secretion system protein from Pseudomonas putida KT2440

 Score =  264 bits (674), Expect = 9e-75
 Identities = 164/448 (36%), Positives = 247/448 (55%), Gaps = 70/448 (15%)

Query: 188 LAGTSELLQTLEKEGPASAPPAEAPIEQSDNSLVRMINSMILEAHREGASDIHIESYPGQ 247
           L    +LL+  +++  ASA          D  +V +++ ++  A  + ASDIH+E  P +
Sbjct: 176 LGELEQLLELGKRQAEASA---------DDAHIVHIVDWLLQYAIEQRASDIHLE--PRR 224

Query: 248 EKTRIRFRRDGLLYTYLELPPSYRNAIVARVKIMCDLDISEKRNPQDGKINFAKYSPQHR 307
           E+ ++R+R DGLL+T    P     A+V+R+K +  +D++EKR PQDG++  ++      
Sbjct: 225 EQGQLRYRIDGLLHTVYAFPAGVTLALVSRLKHLGRMDVAEKRRPQDGRLQ-SRLPGGGE 283

Query: 308 IELRVATIPTNNGLEDVVMRILASSKPIPMSE----LGLSPNNLAQLTKAVERPYGMVLC 363
           +ELR++T+PT  G E +V+R+     P  + E    LGL    LAQ  + + +  G++L 
Sbjct: 284 VELRLSTLPTPFG-EKLVLRLF---DPHQLQEGFDRLGLHGQQLAQWQRLLRQRQGIILV 339

Query: 364 VGPTGSGKTTTLHSALMQINTPERKIWTAEDPVEITQPGLRQVQINPRIDWTFAKALRAF 423
            GPTGSGKT+TL+++L  + TP+  + T EDP+E  +P   Q+Q+ P +D  FA A+RA 
Sbjct: 340 TGPTGSGKTSTLYTSLKLLATPQVNLCTIEDPIERLEPAFNQLQVQPALDLGFANAVRAM 399

Query: 424 VRADPDVIMVGEIRDEETAKTAIEASLTGHLVLSTLHTNSAPETVTRLLDMGMDPFNFAD 483
           +R DPD+IM+GEIRD ETA  A++A+LTGHLVLSTLHTN A   +TRL ++G+  +    
Sbjct: 400 LRQDPDIIMIGEIRDRETALVAVQAALTGHLVLSTLHTNDACAAITRLQELGVADYLIKA 459

Query: 484 SLLAVLAQRLVRRLCSRCTSSSPASSERIEELLDDYLHAFGTREDDAGRQRNAVRDVWLR 543
           +L+ V+AQRLVR +C+ C + S A+                                   
Sbjct: 460 TLIGVMAQRLVRTVCTDCQTGSSAT----------------------------------- 484

Query: 544 RYGREGRLHAYTSVGCKHCGGTGFKGRVGIHELMVMSKTLRRLVQTGARAEELQLAALQE 603
                          C+ C GTGF+GR G+ EL+  S TLR L+   A    L+  AL +
Sbjct: 485 ---------------CRACRGTGFQGRTGLFELLEPSDTLRALIGPDADLTCLRRQALAD 529

Query: 604 GMRTLRQDGIEKVLAGHTTVEEVRATSN 631
           G+  LR+ G  KV AG T  EEV    N
Sbjct: 530 GLVDLRRCGEAKVAAGQTRAEEVLRVCN 557