Pairwise Alignments

Query, 632 a.a., Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB from Variovorax sp. SCN45

Subject, 598 a.a., putative Type II secretion system protein from Pseudomonas putida KT2440

 Score =  260 bits (665), Expect = 1e-73
 Identities = 177/514 (34%), Positives = 271/514 (52%), Gaps = 72/514 (14%)

Query: 149 VGQCLDLDSVLGAAYEKIGEPSIGIFSTNVDPGRPLEFD---------LAGTSELLQTLE 199
           + QCL  + VL     + G   +G+F+   DP R    D         LA  ++L   L 
Sbjct: 115 LAQCLKRECVL----IEQGGQLLGVFADPFDPARLAWIDDVLQGAPLYLAHAADLATFLA 170

Query: 200 K---------------EGPASAPPAE----APIEQSDNSLVRMINSMILEAHREGASDIH 240
           +               E  +   P +    A I +  + +V+++NS + +A +  ASDIH
Sbjct: 171 RHEESFHAVDALDHDAEASSEGDPLQRLSLASISEDQSRVVKLVNSTLYDALKLHASDIH 230

Query: 241 IESYPGQEKTRIRFRRDGLLYTYLELPPS-YRNAIVARVKIMCDLDISEKRNPQDGKINF 299
           +    GQ  T I++R DG+L    +   S + + +++R+K+M +LDI EKR PQDG+   
Sbjct: 231 L-GMTGQGLT-IKYRIDGVLNGAGKASGSAFADQVISRIKVMAELDIGEKRVPQDGRFKV 288

Query: 300 AKYSPQHRIELRVATIPTNNGLEDVVMRILASS------KPIPMSELGLSPNNLAQLTKA 353
           A    Q  I+ RV+ +P+  G ED V+R+L           + +  LG +   L  L + 
Sbjct: 289 AVGDRQ--IDFRVSIMPSIFG-EDAVLRVLDKQDLSDRVSGVQLQALGFADETLRALRRL 345

Query: 354 VERPYGMVLCVGPTGSGKTTTLHSALMQINTPERKIWTAEDPVEITQPGLRQVQINPRID 413
              PYGM+L  GPTGSGKTTTL++ + +IN    KI T EDPVE   PG+ Q+ +N +  
Sbjct: 346 AAEPYGMILVTGPTGSGKTTTLYAMISEINHGVDKIITIEDPVEYQLPGVLQIPVNEKKG 405

Query: 414 WTFAKALRAFVRADPDVIMVGEIRDEETAKTAIEASLTGHLVLSTLHTNSAPETVTRLLD 473
            TFA+ LR+ +R DPD I+VGEIRD +TA+ A++++LTGHLV +T+H N+  + + R   
Sbjct: 406 LTFARGLRSILRHDPDKILVGEIRDPDTAQIAVQSALTGHLVFTTIHANNVFDVIGRFSQ 465

Query: 474 MGMDPFNFADSLLAVLAQRLVRRLCSRCTSSSPASSERIEELLDDYLHAFG-TREDDAGR 532
           M +DP++F  +L AVLAQRL+R  C  C  ++P   +      DD L+  G TRE  AG 
Sbjct: 466 MQVDPYSFVSALNAVLAQRLIRLACPHC--ATPCEHD------DDTLYGSGLTREGVAGW 517

Query: 533 QRNAVRDVWLRRYGREGRLHAYTSVGCKHCGGTGFKGRVGIHELMVMSKTLRRLVQTGAR 592
               V+                   GC HC G+G++GR  I EL+ +   LR+++     
Sbjct: 518 TFVRVK-------------------GCGHCRGSGYRGRSAIAELLHLDDDLRQMIVERRP 558

Query: 593 AEELQLAALQEGMRTLRQDGIEKVLAGHTTVEEV 626
             +++  A Q G+R LR   ++ V  G TT+EE+
Sbjct: 559 LAQIKTLACQRGLRLLRASALDLVRDGRTTLEEI 592