Pairwise Alignments

Query, 254 a.a., Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA from Variovorax sp. SCN45

Subject, 359 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  135 bits (341), Expect = 9e-37
 Identities = 91/238 (38%), Positives = 111/238 (46%), Gaps = 48/238 (20%)

Query: 12  PVEVHKAWREQFHRMIAGLLGVLVLTLALVSARRRSKGMAQIALASLLVAIGIPLYMKGQ 71
           PVE  K W E  HR  AG L V++  LA  + RR ++      L  LL            
Sbjct: 65  PVEAAKGWAEMVHRYFAGSLAVVIALLAFQAMRRHARDGQPYRLPMLL------------ 112

Query: 72  HVAASALAIIGEAILIAAAARWSNTDLSRVSAITLAVIIFQALLGMWTVTWLLKPVVVMA 131
                                             L V++ QA  GMWTVT  L P VV A
Sbjct: 113 ----------------------------------LGVVLAQAAFGMWTVTLKLWPQVVTA 138

Query: 132 HLLGGLLTFSLLVWTAWRATHLPIRLADAP-RLRGWIGAGIAVLGVQIALGGWTSANYAA 190
           HLLGG  T SLL   + R +     L   P  LR      + V+  QIALGGW SANYAA
Sbjct: 139 HLLGGFTTLSLLFLLSLRLSRAFAPLPKLPLSLRRIAALALLVVIGQIALGGWVSANYAA 198

Query: 191 LACGNDFPTCVGQWWPRHDFGEAFVLWRGIGVDYEGGILDGEARIAIQLAHRIMAGVV 248
           +AC  D PTC GQWWP  DF   F L + +G +Y GG LD +AR AI ++HR+ A +V
Sbjct: 199 VAC-IDLPTCHGQWWPAADFSNGFHLTQHVGPNYLGGQLDSDARTAIHISHRLGALLV 255



 Score = 33.1 bits (74), Expect = 8e-06
 Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 22/125 (17%)

Query: 65  PLYMKGQ---------HVAASALAIIGEAILIAAAARWSNTDLSRVSAITLAVIIFQALL 115
           P Y+ GQ         H++    A++   +L+  + +     L  +S + L  +  Q  L
Sbjct: 229 PNYLGGQLDSDARTAIHISHRLGALLVTCVLLMLSWKLHRCGLPGLSRLVLLALALQVGL 288

Query: 116 GMWTVTWLLKPVVVMAHLLGGLLTFSLLVWTAWRATHLPIRLADAPRL---RGW-----I 167
           G+  V + L   V +AH  GG +    +V   +R     IR+ D  R+    GW     +
Sbjct: 289 GISNVVFHLPLAVAVAHNAGGAMLLLSMVLVNYR-----IRVVDKVRVGVGHGWRLRPVV 343

Query: 168 GAGIA 172
           G GI+
Sbjct: 344 GVGIS 348