Pairwise Alignments

Query, 425 a.a., Transcriptional regulator LigR, LysR family from Variovorax sp. SCN45

Subject, 315 a.a., galactose-binding protein regulator from Pseudomonas putida KT2440

 Score =  109 bits (272), Expect = 1e-28
 Identities = 79/276 (28%), Positives = 127/276 (46%), Gaps = 4/276 (1%)

Query: 122 LNGRRLAVVASLAQKRNMPAVAREFGITQPAISSALKDLESGLGVALFTRTARGLSPTPA 181
           ++ R++ ++ +L +  N+   A     TQPA S  L+ LE  LGV LF R  RG+  T  
Sbjct: 20  ISSRQITLLNALGEFGNLRRAAAAMHTTQPAASLLLQQLEERLGVRLFERLPRGMQATLY 79

Query: 182 GEIVAFYFKRVLSELRHIGPDIAASEGSLQGSVTVGALPLGRTQILPLAIASLLARHPQL 241
           GE++  Y +  L E  H    IA       G V VG++      +L  A+ +     P++
Sbjct: 80  GEVMIRYAQNALHEFDHAQAQIAELARGALGLVRVGSVMGPVPGVLTKAVLAYKRDQPKV 139

Query: 242 HVSTVESPYDALAASLRSGDIDFILGALRNNAGEVKDLQQQALFE--DRISVIARAGHPL 299
            +S      D L  +L  GD D ++G L + + + ++L  + LF+  +++ +IARAGHPL
Sbjct: 140 RISLEVGTSDTLLPALLRGDFDMVVGRLPDQS-DSQELNIE-LFDGGEQMRIIARAGHPL 197

Query: 300 ARAERIDFRMLREARWTLSRQGSPSRELLERFFSNARQAPPLPAVETGDLAVLRGLLLES 359
           A A  +    L    W L   GSP R  +E           L  VET  +     +L  S
Sbjct: 198 ATATGLQLADLVSLTWILHPIGSPMRRRVESALQAGGMVQSLDIVETASILATTAMLEAS 257

Query: 360 DMLTAISAHQLRYEIRDGSLVVLDFPLEETRREIGL 395
           +M+  +     ++  R G + VL   L      +G+
Sbjct: 258 EMIAVVPNDVAQHYARYGMVAVLPVELPLAMANLGV 293



 Score = 52.8 bits (125), Expect = 1e-11
 Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 8/145 (5%)

Query: 18  ALGINLRHLRAFSAVAAAGSVAAAADALYRVASAVTRSVLDLEAALGRPLFDRRARGMAL 77
           AL I+ R +   +A+   G++  AA A++    A +  +  LE  LG  LF+R  RGM  
Sbjct: 17  ALKISSRQITLLNALGEFGNLRRAAAAMHTTQPAASLLLQQLEERLGVRLFERLPRGMQA 76

Query: 78  NAYGELVLVRALRIEREFEEARTQL--VARGGMDGGADVHSLFTSILNGRRLAVVASLAQ 135
             YGE+++  A     EF+ A+ Q+  +ARG + G   V S+   +     +   A LA 
Sbjct: 77  TLYGEVMIRYAQNALHEFDHAQAQIAELARGAL-GLVRVGSVMGPVPG---VLTKAVLAY 132

Query: 136 KRNMPAV--AREFGITQPAISSALK 158
           KR+ P V  + E G +   + + L+
Sbjct: 133 KRDQPKVRISLEVGTSDTLLPALLR 157