Pairwise Alignments

Query, 338 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

Subject, 328 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 54.3 bits (129), Expect = 4e-12
 Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 17/248 (6%)

Query: 53  LAPVP----VALERGFFEKNGLDVELLNWAGSSDQMLEALATGKADLGVGLIHRWVKPLE 108
           LAP+     VA  +G FEK GLD+ + N+  S  Q L+ +  G AD+             
Sbjct: 36  LAPISALTIVAKAQGLFEKEGLDISVSNFT-SGKQALDTVIGGGADIATTAEAPVTAAAM 94

Query: 109 AGFDVKVVGSVHGGCLRLVGAKAAGVTAELASLKGKTIGVSDQNSPARQFYAIHLAKKGI 168
           AG  +  V  +    ++ + AK A + +  A LKGK I  +       + Y   L KK  
Sbjct: 95  AGQPIAFVTGMEYSDIKTLTAKKAAIKS-FADLKGKKIAYT--AGTGSEVYTTELLKKAG 151

Query: 169 DVDKDVDW-RVYPADLLDVAVKKGEIQAIADGDPNVFLIEKRNPGVFTEIA-NSAKGEYA 226
              KDV    + P ++L  A+  G I A    +P+   I      +  ++A    KG Y+
Sbjct: 152 LTSKDVTLVNLKPQEMLP-ALAAGSIDAYDTWEPH---IANGRKALGDDVALLDTKGVYS 207

Query: 227 ERLCCIVGARGELARNDKPRAAAVVRALAQASDYVSENPNESARIYSKYAPKVALEDLQR 286
           E    +V    +  + +    +  + AL  A  +V  +P E+  + SK A  +  EDL+ 
Sbjct: 208 ETFNIVV--MQDYLKANPQIVSKFLAALIAAEAWVKAHPEEAIEVVSK-AVGMKPEDLKP 264

Query: 287 LLGELTYK 294
           +  +  Y+
Sbjct: 265 IWSDYVYQ 272