Pairwise Alignments

Query, 338 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

Subject, 352 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  268 bits (684), Expect = 2e-76
 Identities = 134/300 (44%), Positives = 194/300 (64%), Gaps = 3/300 (1%)

Query: 39  PRKLTFAWSQAGFCLAPVPVALERGFFEKNGLDVELLNWAGSSDQMLEALATGKADLGVG 98
           PRKL  A +    CLAPV +A  +GFF K+ LDVEL+N+  S++ +LEA+ATGKAD GVG
Sbjct: 56  PRKLKLAVNLNAVCLAPVVIAHGQGFFTKHNLDVELVNFGNSTEVLLEAIATGKADAGVG 115

Query: 99  LIHRWVKPLEAGFDVKVVGSVHGGCLRLVGAKAAGVTAELASLKGKTIGVSDQNSPARQF 158
           +  RW+K LE GFDVK+    HGGCLRL+ A   G  A+L  LKGK IGV+D  SP R F
Sbjct: 116 MALRWLKALEQGFDVKLTAGTHGGCLRLLSA-VNGAVAKLEDLKGKAIGVTDMASPDRNF 174

Query: 159 YAIHLAKKGIDVDKDVDWRVYPADLLDVAVKKGEIQAIADGDPNVFLIEKRNPGVFTEIA 218
           ++I L K G+D  +DV+WR+YPADLL  A+++GE+QA++  DP ++ + K   GV  E++
Sbjct: 175 FSILLKKHGVDPVRDVEWRLYPADLLGTALERGEVQAVSGSDPFMYRLIK--SGVARELS 232

Query: 219 NSAKGEYAERLCCIVGARGELARNDKPRAAAVVRALAQASDYVSENPNESARIYSKYAPK 278
            +   EYA   CC+VG  G+L R DK    A+ +A+ +A DY  ++P E A+ +  +A  
Sbjct: 233 TNLVEEYANLSCCVVGVTGKLVREDKRVVVALTQAILEAHDYSVQHPEEVAKGFQAHALN 292

Query: 279 VALEDLQRLLGELTYKHHPAGKALRNEVEAFATDFRNAGILKKSTDVARFANHVSLDVLA 338
            ++E++Q +L + T+ HH  G AL  E+  + TD +   ++ KSTD   FA  ++ DV +
Sbjct: 293 TSIEEVQAILHDHTHGHHAVGAALTREILTYVTDLKTVEVISKSTDPVEFAKEITADVFS 352