Pairwise Alignments

Query, 253 a.a., Cytochrome c oxidase polypeptide III (EC 1.9.3.1) from Variovorax sp. SCN45

Subject, 295 a.a., cytochrome c oxidase subunit 3 from Pseudomonas putida KT2440

 Score =  306 bits (784), Expect = 3e-88
 Identities = 149/253 (58%), Positives = 180/253 (71%), Gaps = 4/253 (1%)

Query: 4   SWGKPTFFVGVAMMIAVLFGWFGDVVRESVRGNYNKQVDVSFRMGMIWFIFSEVMFFAAF 63
           S G   FFVG   +  +LFGWFG VV+ES  G Y+ Q+D SFR GM WFIFSEVMFF AF
Sbjct: 44  SHGPLIFFVGALFLAYMLFGWFGAVVKESRAGLYSPQLDRSFRWGMSWFIFSEVMFFLAF 103

Query: 64  FGALFYARTLALPWLGGEGDGVMTNSLLWPEFSAAWP---SAGPGDVGGHFQTIPAWGLP 120
           FGALFY R LA PWLGGEG   +T+ +LWP F   WP   +  P       + I  W LP
Sbjct: 104 FGALFYVRVLAGPWLGGEGAKGVTH-MLWPTFEFTWPLLHTPDPKLFPPPKEVIDPWHLP 162

Query: 121 LLNTLILLTSGTTVTAAHHALKGGHRKALLIWLGLTVALGCLFLFFQAEEYIHAYTELNL 180
           L+NT++L++S  T+T AHHAL+  HR  L  W+ LT+ LG  F+  QA EY  AYT+L L
Sbjct: 163 LINTILLVSSSVTITIAHHALRRDHRGPLKFWMALTIVLGISFIALQAFEYYEAYTKLGL 222

Query: 181 TLGSGIYGSTFFMLTGFHGLHVTLGTIMLAINWFRCLKGHFDKDNHFAFEAVAWYWHFVD 240
           TLGSGIYG+TFFMLTGFHG HVTLGTI+L + + R L+GHF+ + HF FEA +WYWHFVD
Sbjct: 223 TLGSGIYGATFFMLTGFHGAHVTLGTIILIVMFVRILRGHFNPEKHFGFEAASWYWHFVD 282

Query: 241 VVWLGLFLFVYVL 253
           VVW+GLF+FVYVL
Sbjct: 283 VVWVGLFIFVYVL 295