Pairwise Alignments

Query, 208 a.a., DNA polymerase III alpha subunit (EC 2.7.7.7) from Variovorax sp. SCN45

Subject, 1173 a.a., DNA polymerase III subunit alpha from Pseudomonas simiae WCS417

 Score =  162 bits (409), Expect = 3e-44
 Identities = 90/212 (42%), Positives = 128/212 (60%), Gaps = 5/212 (2%)

Query: 1   MSAPFVHLHLHSEYSLADSTLRIGELVKRCVALGQPAVALTDLDNIFAAVKFYKACEGAG 60
           M A FVHL LH+EYSL D  +RI  LVK  V +  PAVA+TD +N+ + VKFYK   GAG
Sbjct: 1   MPASFVHLRLHTEYSLVDGLVRIKPLVKTLVGMNMPAVAVTDQNNMCSLVKFYKNAMGAG 60

Query: 61  IKPIIGADVHLA--DGNESASRLTLLCRDRGGYLSLSRLLSRAWMEGHRTEGVVLRPEWL 118
           IKPI GAD+ L+  D +   SR++LL  +  GY +L+ L+SR +++G R   +++  EW+
Sbjct: 61  IKPICGADLWLSNKDPDNPLSRISLLAMNGVGYRNLTELISRGFIDGQRNGSIIIEREWV 120

Query: 119 REDNDGLFAL--AGRNSLAARLAASNREELAHAWLVDWQGVFGDRLHLELTRTQRDGEDA 176
            E ++GL  L  A    +   L   N +E A     +W  VF DR +LE+ RT R  ++ 
Sbjct: 121 AEASEGLIMLSAAKEGEIGIALLGGNPQE-AEVLAKEWMQVFPDRFYLEVQRTNRPNDEE 179

Query: 177 FNAFALQAASKRGLPVVASNDARFLDRDGFEA 208
               A+  A K G P+VA+ND RF+ ++ FEA
Sbjct: 180 HLHAAVALADKLGAPLVATNDVRFIKKEDFEA 211