Pairwise Alignments

Query, 208 a.a., DNA polymerase III alpha subunit (EC 2.7.7.7) from Variovorax sp. SCN45

Subject, 1174 a.a., DNA polymerase III, alpha subunit from Pseudomonas putida KT2440

 Score =  170 bits (430), Expect = 1e-46
 Identities = 91/211 (43%), Positives = 128/211 (60%), Gaps = 3/211 (1%)

Query: 1   MSAPFVHLHLHSEYSLADSTLRIGELVKRCVALGQPAVALTDLDNIFAAVKFYKACEGAG 60
           MS PFVHL +HSE+SL D  +RI  L K    +  PAVA+TD  N+ + VKFYK   GAG
Sbjct: 1   MSVPFVHLRVHSEFSLVDGLVRIKPLAKALTGMNMPAVAITDQSNMCSLVKFYKTAMGAG 60

Query: 61  IKPIIGADVHLADGNESA--SRLTLLCRDRGGYLSLSRLLSRAWMEGHRTEGVVLRPEWL 118
           IKPI GAD+ LA  +  A  SR+  L  D  GY +L+ L+SR W +G R   V+L+ EW+
Sbjct: 61  IKPICGADLWLAGADPEAPLSRICFLAMDPKGYRNLTELISRGWTDGQRNGLVILQREWI 120

Query: 119 REDNDGLFAL-AGRNSLAARLAASNREELAHAWLVDWQGVFGDRLHLELTRTQRDGEDAF 177
              ++GL AL AG+         + R++ A A L DW G+F +R ++E+ RT R  ++ +
Sbjct: 121 APASEGLIALSAGKEGDIGMALLAGRQDEAEALLQDWMGMFPERFYVEVQRTNRARDEEY 180

Query: 178 NAFALQAASKRGLPVVASNDARFLDRDGFEA 208
              A+  A K G P+VA+ND RF+ +  F+A
Sbjct: 181 VHAAVALADKLGAPLVATNDVRFIKQADFDA 211