Pairwise Alignments

Query, 247 a.a., Transposase from Variovorax sp. SCN45

Subject, 281 a.a., IS3 family transposase from Magnetospirillum magneticum AMB-1

 Score = 63.2 bits (152), Expect = 6e-15
 Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 8/212 (3%)

Query: 19  FGYRRIHDMLRPHFPGVNHKKVYRLYSAANLA--VRKRRKAKRPVSERVPLQLARTV--- 73
           +G R++   L+     VN K+V RL     L    +K   +K     +    L R +   
Sbjct: 53  YGVRQMAWHLQNEGHPVNVKRVRRLMRLMGLMPIYQKPNTSKPAKGHKTYPYLLRGLRID 112

Query: 74  --NEVWSMDFVSDSLSTGRRIKCLTVADDFSHECVSISVDWGISGQYVTRLLDQAAVFRG 131
             N+VW  D     +  G  +  + + D  + + ++  +   +   +   +L++A +  G
Sbjct: 113 RPNQVWCADITYLPMRRGF-LYLIAIMDWATRKVLAWRISNTLEADFCVEVLNEAILRFG 171

Query: 132 YPLAVRTDNGPEFTSRAFMGWAQTHGIRHILIEPGRPMQNGYIESFNGKFRDECLNEQWF 191
            P  + TD G +FTS A++   +  G R  +   GR + N +IE      + EC+    +
Sbjct: 172 PPEIMNTDQGSQFTSFAWIDRLKRAGTRISMDGKGRCIDNVFIERLWRSLKYECVYLHAW 231

Query: 192 ETLMQARSAITAWRQDYNEVRPHSSCGRMPPA 223
           ET  QAR+ I  W   YN  RPH++ G   PA
Sbjct: 232 ETGSQARAGIGPWITFYNHKRPHAAHGGRTPA 263