Pairwise Alignments

Query, 247 a.a., Transposase from Variovorax sp. SCN45

Subject, 286 a.a., transposase from Agrobacterium fabrum C58

 Score = 60.1 bits (144), Expect = 5e-14
 Identities = 64/222 (28%), Positives = 93/222 (41%), Gaps = 15/222 (6%)

Query: 17  RRFGYRRI-HDMLRPHFPGVNHKKVYRLYSAANLAVRKRRKA------KRPVSERVPLQ- 68
           R +G RR+ HD+L        H+ + RL     L  R RR+        RPV     L  
Sbjct: 60  RTYGARRVWHDVLEEGLSCGLHR-IERLMRLNALRARPRRRGFPKDAGDRPVVMPNVLDR 118

Query: 69  --LARTVNEVWSMDFVSDSLSTGRRIKCLTVADDFSHECVSISVDWGISGQYVTRLLDQA 126
             +A   N+ W  DF     + G  +    V D FS   V  S++  ++ Q VT  L  A
Sbjct: 119 QFVADRPNQKWVADFTYIWTAEGW-LYVAAVIDLFSRRVVGWSMNANMTAQLVTDALIMA 177

Query: 127 AVFRGYPLAV--RTDNGPEFTSRAFMGWAQTHGIRHILIEPGRPMQNGYIESFNGKFRDE 184
              RG P A+   +D G ++TS  F      HGI   +   G    N  +ESF    + E
Sbjct: 178 IWRRGKPDALLHHSDQGSQYTSEQFQRLMGDHGITCSMSRSGNVWDNAAMESFFSSLKTE 237

Query: 185 CLNEQWFETLMQARSAITAW-RQDYNEVRPHSSCGRMPPAKF 225
               + + T   AR+ +  +  + YN  R HS+ G + P  F
Sbjct: 238 RTARKVYRTRNDARADVFDYIERFYNPKRRHSTLGYLSPDDF 279