Pairwise Alignments

Query, 391 a.a., Mobile element protein from Variovorax sp. SCN45

Subject, 511 a.a., transposase from Pseudomonas putida KT2440

 Score =  387 bits (993), Expect = e-112
 Identities = 198/386 (51%), Positives = 252/386 (65%), Gaps = 12/386 (3%)

Query: 3   RVGEDVSERLDVIPAEFFVHRHIYGKWACRCCQCLVQEPAAPQIIDGGMPAAGLVAHTMV 62
           R+GEDVSE+LD  P  F V +H+ GKWACR C+ L+Q P   Q+ID G+P AGL+AH MV
Sbjct: 135 RIGEDVSEKLDYTPGVFTVEQHVRGKWACRQCETLIQAPVPAQVIDKGIPTAGLLAHVMV 194

Query: 63  SHFVDHLPYYRLESINARSGVHTPRSTLASWSGRGGAALVPLYDAHKRFVLSAAVLHADE 122
           + F DHLP YR E I  R+G+   RSTLA W G+ G  L PL DA +  VL   V+HADE
Sbjct: 195 AKFADHLPLYRQEKILGRAGLAIARSTLAQWVGQTGVRLQPLVDALREAVLKQGVIHADE 254

Query: 123 TPVAMLDPGAGKTKRAYVWTYARGAFDAVPGVIYDFCAGRGAQYPVAFLGPEDDRRSDPG 182
           TPV ML PG  KT RAYVW Y+   F A+  V+YDF   R  ++   FLG          
Sbjct: 255 TPVQMLAPGEKKTHRAYVWAYSTTPFSALNAVVYDFSPSRAGEHARNFLG---------D 305

Query: 183 WRGTLVRDEYAAYDKVMVAQPGRIPAGCLAHARRKYDELLRDAGKSAVADEALRRIAQIY 242
           W G LV D++A Y      + G    GC+AHARRK+ + L  A KS +A++AL  I+ +Y
Sbjct: 306 WSGKLVCDDFAGYKAGF--EQGITEIGCMAHARRKFFD-LHVANKSQLAEQALHSISGLY 362

Query: 243 RLERELAALTSQERLTRRQRDAKPLWEDLHSWLRLERGRVPDGSATAKALNYSLNAWSAL 302
            +ER+   ++ ++R   RQ  A P+ + LH W+  +R  VP+GSATAKAL+YSL  W AL
Sbjct: 363 EVERQAREMSDEDRWRIRQELAVPISKTLHEWMLAQRDLVPNGSATAKALDYSLKRWVAL 422

Query: 303 TQNLLDGDVNVDNNHCENLIRPWAQGRRAWLFAGSELAGQRAAVVMSLVRSAKLQGHDPW 362
           T+ L DG V +DNN  EN IRPWA GR  WLFAGS  +G+RAA +MSL++SA++ GHDP+
Sbjct: 423 TRYLDDGSVPIDNNQVENQIRPWALGRSNWLFAGSLRSGKRAAAIMSLIQSARMNGHDPY 482

Query: 363 AYLKDVLTRLPTHLNSRIDELLPHNW 388
           AYLKDVLTRLPT   S I +LLPH W
Sbjct: 483 AYLKDVLTRLPTQRASEIGQLLPHQW 508