Pairwise Alignments

Query, 391 a.a., Mobile element protein from Variovorax sp. SCN45

Subject, 510 a.a., transposase from Pseudomonas putida KT2440

 Score =  220 bits (561), Expect = 6e-62
 Identities = 134/393 (34%), Positives = 211/393 (53%), Gaps = 18/393 (4%)

Query: 4   VGEDVSERLDVIPAEFFVHRHIYGKWACRCCQCLVQEPAAP-QIIDGGMPAAGLVAHTMV 62
           VGE  SE+LD++P +  V +H+   + CR C+        P Q+I+  M +  ++A  + 
Sbjct: 126 VGEQTSEQLDIVPMQIRVLKHVRKIYGCRGCETAPVTADKPAQLIEKSMASPSVLAMLLT 185

Query: 63  SHFVDHLPYYRLESINARSGVHTPRSTLASWSGRGGAALVPLYDAHKRFVLSAAVLHADE 122
           + +VD LP +R E++  R G+  PR TLA W  +      PL +  +  +L + V+H DE
Sbjct: 186 TKYVDGLPLHRFETVLNRHGIEIPRQTLARWVIQCSEHFQPLLNLMRDRLLESPVIHCDE 245

Query: 123 TPVAML-DPGAGKTKRAYVWTYARGAFDAVPGVIYDFCAGRGAQYPVAFLGPEDDRRSDP 181
           T V +L +P    T ++++W  A G  D    V++D+   R  + P+  L          
Sbjct: 246 TRVQVLKEPDRDPTSQSWMWVQASGPPDRQV-VLFDYTTSRAQEVPLRLL---------E 295

Query: 182 GWRGTLVRDEYAAYDKVMVAQPGRIPAGCLAHARRKYDEL--LRDAGKSAVADEALRRIA 239
           G+RG ++ D+YA Y+  +  QPG     C+AH RRK+ E   ++  GKS  AD AL  I 
Sbjct: 296 GYRGYVMTDDYAGYN-ALALQPGVERLACMAHVRRKFVEAQKVQPKGKSGRADVALTMIN 354

Query: 240 QIYRLERELAALTSQERLTRRQRDAKPLWEDLHSWLRLERGRVPDGSATAKALNYSLNAW 299
           ++Y +ER+L   + ++R   RQ  + P+ E L SWL     +V   S   KA+ Y  N W
Sbjct: 355 KLYGIERDLKDASDEQRFIGRQERSLPILEQLKSWLDKTHSQVTPQSVLGKAVLYLANNW 414

Query: 300 SALTQNLLDGDVNVDNNHCENLIRPWAQGRRAWLFAGSELAGQRAAVVMSLVRSAKLQGH 359
           + L + +  G + +DNN  E  I+P+  GR+AWLF+ +      +A + SLV +AK+ G 
Sbjct: 415 NRLERYVEAGHLPIDNNLAERAIKPFVIGRKAWLFSDTPKGATASAQIYSLVETAKVNGQ 474

Query: 360 DPWAYLKDVLTRLPTHLNSRID--ELLPHNWRP 390
           +P+ +L+ VL RLP H +S  D   LLP N  P
Sbjct: 475 EPYTWLRHVLERLP-HASSVADYEALLPWNCSP 506