Pairwise Alignments

Query, 391 a.a., Mobile element protein from Variovorax sp. SCN45

Subject, 510 a.a., transposase from Pseudomonas putida KT2440

 Score =  214 bits (546), Expect = 3e-60
 Identities = 127/392 (32%), Positives = 210/392 (53%), Gaps = 16/392 (4%)

Query: 4   VGEDVSERLDVIPAEFFVHRHIYGKWACRCCQCLVQEPAAP-QIIDGGMPAAGLVAHTMV 62
           +GE+VSE+L+++P +  V +H+   + CR C+        P Q+I+  M +  ++A  + 
Sbjct: 126 IGEEVSEQLEIVPMQIRVIKHVRKVYGCRDCESAPVTADKPAQMIEKSMASPSVLAMLLT 185

Query: 63  SHFVDHLPYYRLESINARSGVHTPRSTLASWSGRGGAALVPLYDAHKRFVLSAAVLHADE 122
           + +VD LP +R E +  R G+  PR TLA W  +      PL +  +  +L + ++H DE
Sbjct: 186 TKYVDGLPLHRFEKVLGRHGIDIPRQTLARWVIQCSEHFQPLLNLMRESLLKSRIIHCDE 245

Query: 123 TPVAML-DPGAGKTKRAYVWTYARGAFDAVPGVIYDFCAGRGAQYPVAFLGPEDDRRSDP 181
           T V +L +PG   + ++++W    G  D  P +++D+   R  + PV  L          
Sbjct: 246 TRVQVLKEPGREPSSQSWMWVQTGGPPDR-PVILFDYATSRAQEVPVRLLD--------- 295

Query: 182 GWRGTLVRDEYAAYDKVMVAQPGRIPAGCLAHARRKYDEL--LRDAGKSAVADEALRRIA 239
           G+RG ++ D+YA Y+  + AQ G    GC AHARRK+ E   ++  GK+  AD AL  I 
Sbjct: 296 GYRGYVMTDDYAGYN-ALAAQDGLERLGCWAHARRKFVEAQKVQPKGKTGRADIALNLIN 354

Query: 240 QIYRLERELAALTSQERLTRRQRDAKPLWEDLHSWLRLERGRVPDGSATAKALNYSLNAW 299
           ++Y +ER+L     ++R   R   + PL   L +W+   + +V   +A  KA+ Y  + W
Sbjct: 355 KLYGVERDLKDSDDEDRKVARMERSLPLLTQLKNWVEKTQPQVTTQNALGKAIGYLASNW 414

Query: 300 SALTQNLLDGDVNVDNNHCENLIRPWAQGRRAWLFAGSELAGQRAAVVMSLVRSAKLQGH 359
           S L + +  G + +DNN  E  IRP+  GR+ WLF+ +      +A + SLV +AK  G 
Sbjct: 415 SKLERYVEHGYLPMDNNAAERAIRPFVIGRKNWLFSDTPRGATASAQLYSLVETAKANGQ 474

Query: 360 DPWAYLKDVLTRLPTHLN-SRIDELLPHNWRP 390
           +P+A+L+  L RLP   +    + LLP N +P
Sbjct: 475 EPYAWLRHALERLPQAASVEDYEALLPWNCKP 506