Pairwise Alignments

Query, 227 a.a., Integrase/recombinase, RitA from Variovorax sp. SCN45

Subject, 299 a.a., Tyrosine recombinase XerC from Pseudomonas putida KT2440

 Score = 74.3 bits (181), Expect = 2e-18
 Identities = 67/234 (28%), Positives = 98/234 (41%), Gaps = 29/234 (12%)

Query: 5   LRAFLRYLHHTGLNPHALAGCVPSIRRW----NLVGL------------------PTYLS 42
           LR  +  LHH G +P +LA  + ++R      N  GL                  P  L 
Sbjct: 53  LRQLIARLHHHGQSPRSLARLLSAVRGLYRYLNREGLCQHDPANGLSAPKGERRLPKVLD 112

Query: 43  AAQVQKVLDGCDQASAVGRRDFAILMMLSKIGLRADEVATLTLDDIDWRAGDMLVRAKGR 102
             +  ++LDG      + RRD AIL +    GLR  E+  L LD +D  AG + V  KG 
Sbjct: 113 TDRALQLLDGGVDDDFIARRDQAILELFYSSGLRLSELTNLDLDHLDLAAGLVQVLGKGG 172

Query: 103 QRARMPIALDVGAAIVA-YLQEGRPKSSCRQLFLRSLAPHTGFASASAITMIAKTALERA 161
           +   +P+      A+ A Y   G      R +F+          S  A+ +  K A ER 
Sbjct: 173 KARVLPVGRKAREALQAWYRLRGIGNPRDRAVFITRQGNR---ISPRAVRLRVKVAGERE 229

Query: 162 GIQGYAHQGAHIFRHSLATELLRAGATLSEIGHLLRHKSHDTTRIYAKVDIEAL 215
             Q   H   H+ RHS A+ +L +   L  +  +L H    TT+IY  +D + L
Sbjct: 230 LGQ---HLHPHMLRHSFASHVLESSQDLRAVQEMLGHADISTTQIYTHLDFQHL 280