Pairwise Alignments

Query, 227 a.a., Integrase/recombinase, RitA from Variovorax sp. SCN45

Subject, 298 a.a., Tyrosine recombinase XerD from Pseudomonas putida KT2440

 Score = 78.6 bits (192), Expect = 1e-19
 Identities = 70/224 (31%), Positives = 99/224 (44%), Gaps = 23/224 (10%)

Query: 5   LRAFLRYLHH---TGLNPHALAGCVPSIRRWNLVGLPTYLSAAQVQKVLDGCDQASAVGR 61
           LR F RYL       ++P  L   +P + +     LP  LS A V+ +L   D   A+G+
Sbjct: 80  LRGFFRYLLREKLVAIDP-TLQVDMPQLGK----PLPKSLSEADVEALLQAPDLGEAIGQ 134

Query: 62  RDFAILMMLSKIGLRADEVATLTLDDIDWRAGDMLVRAKGRQRARMPIALDVGAAIVAYL 121
           RD A+L +L   GLR  E+ +LTLD ++ R G + V  KG +   +P+  +    +  Y 
Sbjct: 135 RDRAMLEVLYACGLRVTELVSLTLDQVNLRQGVLRVMGKGSKERLVPMGEEAVVWLERYQ 194

Query: 122 QEGRPKSSCRQLFLRSLAPHTGFASASAITMIAKTALER-------AGIQGYAHQGAHIF 174
           ++GR +       L        F S     M  +T   R       AGI        H  
Sbjct: 195 RDGRAE------LLNGRPSDVLFPSQRGEQMTRQTFWHRIKHHARVAGID--KPLSPHTL 246

Query: 175 RHSLATELLRAGATLSEIGHLLRHKSHDTTRIYAKVDIEALRTL 218
           RH+ AT LL  GA L  +  LL H    TT+IY  V    L+ L
Sbjct: 247 RHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAKARLQQL 290