Pairwise Alignments

Query, 342 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  101 bits (252), Expect = 2e-26
 Identities = 81/331 (24%), Positives = 148/331 (44%), Gaps = 55/331 (16%)

Query: 3   LQIALLLGQDGIVNGAVYGLMALALVLVFSVTRVIFIPQGEFVAFGALSMAALQGGRAPS 62
           +++ + L  +GI+ G++Y ++++ L L+F + RV+    GEF+  G  +           
Sbjct: 1   MEVLIQLVLNGILLGSMYAIISVGLTLIFGIVRVVNFAHGEFLMVGMYAA---------- 50

Query: 63  TLWLLLALAAIVLVVEAWRWKRGATVDWRSALTWCVAFPAVAAVLILGFKPTSLAMQSLA 122
             +LL A   +                           P  AAV I+             
Sbjct: 51  --YLLAAKFGL--------------------------HPYAAAVPIV------------- 69

Query: 123 TLVLIAPLGPLLYRVAYRPLADASVLMLLIVSVALHGVLVGLGLFFFGAE-GSRTSAFSE 181
             +L+  +G  + R   +PL  A   + +  +V L   LV L L  FGA+  S   + ++
Sbjct: 70  --ILLFAIGAAVQRFLIQPLLGAEEHIQIFATVGLSTALVNLALLVFGADLYSIPPSAAQ 127

Query: 182 ARFDLGGIPVNGQSLVVVGVTLVLVIAMFWFFGRSMIGKALRATAINRVGARLSGIPTEL 241
               +GG  +    LV+    L LV  +  F   + +G+A+RATA NR  A L G+  + 
Sbjct: 128 GTVMVGGFSLVKGQLVMFVCALALVAGLHLFMQSTALGRAIRATAQNRTAALLMGVKVDQ 187

Query: 242 SGDLSFALAAVIGAISGLLIAPITTVYYDTGFLIGLKGFVAAIVGGLASYPLALAGALLV 301
              ++F + A    ++  L+ P+  V    G    L  FV  ++GG+ S   A  GA+++
Sbjct: 188 IYVIAFGIGAACVGLASALVMPLYPVTPTIGTYFVLTAFVVVVLGGMRSMYGAFFGAMII 247

Query: 302 GLLEAFSSFW-ASAYKEVLVFTLIIPVLLWR 331
           GL+++ S ++ A   KEV+ F + + +L+++
Sbjct: 248 GLVDSLSGYYIAPDLKEVVYFAIFLAILIFK 278