Pairwise Alignments

Query, 297 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 301 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  146 bits (369), Expect = 5e-40
 Identities = 104/299 (34%), Positives = 147/299 (49%), Gaps = 15/299 (5%)

Query: 6   RFLPSMALLRALEASARLQSFTAAAAELNLTQSAVSRQIRALEELLGGDLFVRERHAVRL 65
           R LP  A LRA E + R  +FT+A+ EL++TQSAVS Q++ LE+L G  LF R + ++RL
Sbjct: 2   RDLPPTATLRAFEVATRHATFTSASEELHVTQSAVSHQLKHLEDLWGLQLFQRGK-SLRL 60

Query: 66  TQAGEAYAQEVREALGRISTATLGFRANPSGGTLNLAILPTFGTRWLAPRLPDFVAEHPG 125
           T AG A A  VRE    + T     R       L ++   +F  +WL PRLP    +HP 
Sbjct: 61  TPAGAALAPIVREFFVNLETTLTDLREQKGRVRLKVSTTYSFALKWLLPRLPGLSQQHPE 120

Query: 126 ITINLVTRLAPFDFRMEQIDAAVHFGQPDWLGAELDFLMSETVVPACSRKLRELHGF-ET 184
           I I L T     +F     D A+  G   +     +F++ E + P  S  L    G    
Sbjct: 121 ILITLETSDKAINFSSADSDVAIRLGNGHYPALHSEFMLREQIFPVASPDLLNRFGAPHE 180

Query: 185 PTDLLKAPLL-----HLVSRPQAWKQWFAAMRTSVDQVPGMLVDQFA---MAAQAAMAGL 236
           P +LL+ PLL      LV +   W+ WF  +  SV  +   +  +FA   M  +AA+ G 
Sbjct: 181 PAELLRYPLLMRDGADLVPK---WEAWFEHVGVSVAALKESV--RFADTNMTIEAALLGQ 235

Query: 237 GIALLPKFLIEQELARGDLVEALDGPVQSADSYYLAWPSGRGDYPPLRSFRRWIGAAAS 295
           GIAL     +E E+  G LV   D P  S  +Y+   P G    P + SFR W+ A ++
Sbjct: 236 GIALARSGHVEAEINDGSLVRLFDVPFASPVAYFFVCPKGIETQPHIVSFRNWLLAEST 294