Pairwise Alignments

Query, 326 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  196 bits (498), Expect = 6e-55
 Identities = 104/276 (37%), Positives = 166/276 (60%), Gaps = 6/276 (2%)

Query: 55  RAFLRNPAAVAGVVLLVCMLILALLAPLLYPGDPLD-----MVAPPLLWPGQDAAYPLGS 109
           +AF RN  AV G+  +  ++  AL AP + P DP +     ++ PP+   G    + LG+
Sbjct: 30  QAFARNKGAVMGLAFMCLVVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGGTWQFILGT 89

Query: 110 DSLGRDVIAGIAHGARVSLAVGVVAAVLSLVIGVLVGATAGYFGGRIDDVLVRITELFQT 169
           D LGRD+++ +  GAR+SL +G+ + V+SL+ G+L+G  AG+F   +   ++R+ ++   
Sbjct: 90  DELGRDLLSRLIQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIMRLMDVMLA 149

Query: 170 MPSFLFVIVVVAIGQPSVPVIVCAIGLASWPVIARLVRAEFRALRETEFVLAARSQGFSH 229
           +PS L  + +VAI  P +   V AI + S P   RL RA        ++V AAR  G   
Sbjct: 150 LPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGL 209

Query: 230 ARIIFQEMLPNALPPVIVTTSVLVASAILIESALSFLGMG-DPNAVSWGSMIGQGRELLR 288
            R++F  +LPN + P+IV  ++  +SAIL  +AL FLG+G  P    WG+M+   R+ + 
Sbjct: 210 PRLMFVTVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIE 269

Query: 289 TAWYLTALPGAAIVLTVLALNLVGDGLNDAFNPRLR 324
            AW++ +LPG  I+L+VLA+NL+GDGL DA +P+L+
Sbjct: 270 RAWWVVSLPGLTILLSVLAINLMGDGLRDALDPKLK 305