Pairwise Alignments

Query, 327 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 336 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  215 bits (548), Expect = 1e-60
 Identities = 128/322 (39%), Positives = 179/322 (55%), Gaps = 15/322 (4%)

Query: 18  VPTVIGVILLNFILMQLIPGDAADVVAAESGSATAESMAQLRTHFGLDLPVIQQLFAYLN 77
           +PT  G+ LL F L++LIPGD  +V+  E      E  AQ     GL+ P+  Q   Y+ 
Sbjct: 13  IPTFFGITLLTFALIRLIPGDPVEVMMGER-RVDPEMHAQAMERLGLNKPLPVQYLDYVG 71

Query: 78  NLAHFSLGISPRYNMPVVSLIGARLGNTLLLMVTALAFALAIGIAAGTVMATRVGRWQDR 137
            LA   LG S R    V          TL L   AL FA  +G+ AG + A + G   D 
Sbjct: 72  KLAQGDLGESLRTRESVWREFLTLFPATLELAFAALLFAGVVGLLAGVIAALKRGSLFDH 131

Query: 138 TLSVLALLLYSTPGFWLGLMAIVLFSVHLGWLPTGGSESIGAGY---TGWTHV------- 187
            +  ++L  YS P FW GL+ I+ FSV LGW P  G   +       TG+  +       
Sbjct: 132 GVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYDIEPKTGFMLIDTLLSDE 191

Query: 188 ----VDVARHLVLPALAMAGFYIAIFSRLTRAAMLEVSRQDFVRTAEAKGLHPWTVNLRH 243
                D   HL+LPA+ +    +A+ +R+TR++MLEV R+D++RTA AKGL P  V   H
Sbjct: 192 EGAFKDAVMHLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTARAKGLSPARVVFVH 251

Query: 244 ILRNALIPVTTVAGMHFGTLLGGAVVVETVFSWPGLGRLAFDSVAGRDYTVLLGVLLMSS 303
            LRNALIPV TV G+  GTLL GAV+ ET+FSWPG+G+   +++  RDY V+   +L+ +
Sbjct: 252 GLRNALIPVLTVFGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARDYPVVQNGILLIA 311

Query: 304 LLVIVANMLVDLLHAWLDPRIQ 325
            LVI+ N +VD+L+   +PRI+
Sbjct: 312 CLVILVNFVVDILYGLANPRIR 333