Pairwise Alignments

Query, 327 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 329 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  268 bits (684), Expect = 2e-76
 Identities = 139/322 (43%), Positives = 203/322 (63%)

Query: 3   LRSASRTLVRTAWQAVPTVIGVILLNFILMQLIPGDAADVVAAESGSATAESMAQLRTHF 62
           +R A+  L R A  A+P ++ V++  F+L++   GDA D      G   A     LR  +
Sbjct: 1   MRRAATLLRRRAISAIPVLLIVLIFTFVLLENASGDAVDAYLVSIGGGDAGLRDALREQY 60

Query: 63  GLDLPVIQQLFAYLNNLAHFSLGISPRYNMPVVSLIGARLGNTLLLMVTALAFALAIGIA 122
           GL+  ++ + + Y +++     G S  ++ PV+ LI  RL NTLLLM +A A A  +G  
Sbjct: 61  GLNGSMLARFWLYASSVLRLDFGWSLAFDRPVLGLILERLPNTLLLMGSATALAFILGTT 120

Query: 123 AGTVMATRVGRWQDRTLSVLALLLYSTPGFWLGLMAIVLFSVHLGWLPTGGSESIGAGYT 182
            G V   R G   DR LS L+L LY+TPGFWLGL+  ++F+V L WLPT G E+I +G  
Sbjct: 121 LGIVAGARPGGLMDRVLSTLSLALYATPGFWLGLVLAIVFAVQLRWLPTSGIETIASGKQ 180

Query: 183 GWTHVVDVARHLVLPALAMAGFYIAIFSRLTRAAMLEVSRQDFVRTAEAKGLHPWTVNLR 242
           G+   +D+ARHLVLP  ++   Y+A+F R+ R AM  +   DFV  AEAKGL    + LR
Sbjct: 181 GFARALDIARHLVLPVASLGLIYLALFLRVMRTAMAAIWPLDFVLFAEAKGLSRRRIVLR 240

Query: 243 HILRNALIPVTTVAGMHFGTLLGGAVVVETVFSWPGLGRLAFDSVAGRDYTVLLGVLLMS 302
           H+ RNA +P+ TV G+   T+LGG+VV+E+VF+ PG GRLA ++V+GRD  +L+G++L S
Sbjct: 241 HVARNAALPLVTVLGLQAATMLGGSVVIESVFAIPGFGRLAQEAVSGRDTPLLMGIILTS 300

Query: 303 SLLVIVANMLVDLLHAWLDPRI 324
           ++ VI+ N+ VD+L+A  DPRI
Sbjct: 301 AVFVILVNLAVDILYAVFDPRI 322