Pairwise Alignments

Query, 475 a.a., Type I secretion system, outer membrane component LapE from Variovorax sp. SCN45

Subject, 492 a.a., efflux transporter outer membrane subunit from Dickeya dianthicola ME23

 Score = 86.3 bits (212), Expect = 2e-21
 Identities = 92/379 (24%), Positives = 157/379 (41%), Gaps = 14/379 (3%)

Query: 64  LELTDAVRQAVARHPSISDAIAMLAQQSGGVDVARAGYYPLVRVGMGAGVNGGASATQGG 123
           L+L  A  + +     +  A A L   SG +    +  Y  V   +G  +N    +T G 
Sbjct: 77  LDLAQASARVIQARAGLGAANAALLP-SGNISGQASRAYQSVETPLGKVLN----STPGF 131

Query: 124 GKRG---VATASVSQMLYDFGKVSGAVGQSEAQVQRQQATVLKQIDAIAQQAAEAVVMTH 180
            + G    A    S  L  FG +      + A+ Q  +A V     A+A Q A+  +   
Sbjct: 132 DRYGNAYEADLGASWELDVFGGLRRGREAALAEYQASEAGVAATRLAVAAQTADIYITIR 191

Query: 181 RYQSLVAIAQEQVQAVEKVLETARLRADAGLSTKADPIQAESRVDSARANLLQVKSQLAQ 240
             Q+ + +A+ QVQ  + +L T     D GL+ +    QAE  +   +A++  +++ L  
Sbjct: 192 GLQARLNVARRQVQTQQDLLATINRLYDKGLAAELQVRQAEGALAQVQASVPVLQTALDT 251

Query: 241 WRERLGTLLGRSVPPRMAPLPE----HLASELRIDLQPDTSL--MPEVLAAEAERRAATA 294
               L  +LG +     A L E      A ++     P   L   P+++ AE    A+ A
Sbjct: 252 AMNALDVMLGSAPGTNRAVLAEASAIPAAPQITATGTPGELLRRRPDLIVAERRLAASNA 311

Query: 295 QLEVAKAQRYPTISLDASVNRPMGGMNSGVPERSGGSHSVMLNLSSVLYQGGALEAQVNT 354
           ++ VA A+ YP  SL   +        S +        S ++ L   L+  G + AQ+N 
Sbjct: 312 RIGVAIAEYYPKFSLSGLLGSATTVSGSNLFTSGASQSSGVIGLRWRLFDFGRINAQINQ 371

Query: 355 AIAAEQAARMRIETARLNAGDQVRNFREQVIGAQARLGVLADRRRSIVEARDLYREQYTL 414
           A   E         A L A + V N    ++  + +  VL     S+  ARD     Y  
Sbjct: 372 AKGQEAETLAAYRLAVLRATEDVENAFSALVNNEEQAHVLTQGVDSLSRARDAAFAAYQH 431

Query: 415 GTRSILDLLNAEQEIHQAA 433
           GT S++++L A++ + +A+
Sbjct: 432 GTLSLIEVLQADESMLRAS 450



 Score = 48.1 bits (113), Expect = 7e-10
 Identities = 58/247 (23%), Positives = 98/247 (39%), Gaps = 32/247 (12%)

Query: 22  AFAQSSYGDLKLSRRLAPSALAKELGIQPG-----LALPEAAETTTPLELTDAVRQAVAR 76
           A  Q+S   L+ +   A +AL   LG  PG     LA   A      +  T    + + R
Sbjct: 236 AQVQASVPVLQTALDTAMNALDVMLGSAPGTNRAVLAEASAIPAAPQITATGTPGELLRR 295

Query: 77  HPSISDAIAMLAQQSGGVDVARAGYYPLVRVGMGAGVNGGASATQG------GGKRGVAT 130
            P +  A   LA  +  + VA A YYP   +   +G+ G A+   G      G  +    
Sbjct: 296 RPDLIVAERRLAASNARIGVAIAEYYPKFSL---SGLLGSATTVSGSNLFTSGASQSSGV 352

Query: 131 ASVSQMLYDFGKVSGAVGQSEAQ-----------VQRQQATVLKQIDAIAQQAAEAVVMT 179
             +   L+DFG+++  + Q++ Q           V R    V     A+     +A V+T
Sbjct: 353 IGLRWRLFDFGRINAQINQAKGQEAETLAAYRLAVLRATEDVENAFSALVNNEEQAHVLT 412

Query: 180 HRYQSLVAIAQEQVQAVE----KVLETARLRADAGLSTKADPIQAESRVDSARANLLQVK 235
               SL         A +     ++E   L+AD  +  +A   + +++ +SARA +   K
Sbjct: 413 QGVDSLSRARDAAFAAYQHGTLSLIEV--LQADESM-LRASDARLQAQAESARAAVAAFK 469

Query: 236 SQLAQWR 242
           +    W+
Sbjct: 470 ALGGGWQ 476