Pairwise Alignments

Query, 459 a.a., Uncharacterized protein YdcJ from Variovorax sp. SCN45

Subject, 458 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  499 bits (1284), Expect = e-145
 Identities = 274/463 (59%), Positives = 326/463 (70%), Gaps = 10/463 (2%)

Query: 1   MNDTTFLSSDEIRSLFSRRMSEMYREEVPLYGDLLDVVANVNADSM-REPTLLAHLRKNG 59
           M  T  +S D+IR  FS+ MS+MYR+EVPLYG L+++VA  NA  +  +P L   L++ G
Sbjct: 1   MPSTAHVSPDQIRRGFSKAMSDMYRDEVPLYGALMELVAETNAHVLDTQPQLAQQLQRTG 60

Query: 60  ELERIDVERHGAIRLGKPEELATIRRLFKVMGMAPVGYYDLSVAGVPVHSTAFRPVTDAS 119
           E++R+D+ERHGAIRLG   ELATI RLF VMGM PVGYYDL+ AGVPVHSTAFR V + +
Sbjct: 61  EIQRLDMERHGAIRLGTAAELATISRLFAVMGMQPVGYYDLTPAGVPVHSTAFRAVHEQA 120

Query: 120 LSNNPFRVFTSLLRLELIEDLALRAEVQQILARRNIFTPRALALIEQAEKAGGLTAAEAE 179
           L  +PFRVFTSLLRLELIE+  LRA  +  LA+R+IFT  AL LIEQAEK GGL A +A+
Sbjct: 121 LQTSPFRVFTSLLRLELIENPDLRAFAETALAKRSIFTRGALTLIEQAEKDGGLNAEDAD 180

Query: 180 EFVAQALETFRWHSEATVSKATYDKLLAAHRLIADVACFKGPHINHLTPRTLNIDDAQVD 239
           EF+ QALETFRWH  ATV+ A Y +L   HRLIADV  FKGPHINHLTPRTL+ID  Q  
Sbjct: 181 EFIRQALETFRWHHTATVTGAQYQQLSDQHRLIADVVAFKGPHINHLTPRTLDIDQVQAA 240

Query: 240 MTRRGMSAKDVIEGPPRRKVPILLRQTSFRALQERVAFVGESEGEAGTHTARFGEIEQRG 299
           M  +G++ K VIEGPPRR  PILLRQTSF+AL E +AF        G+H+ARFGEIEQRG
Sbjct: 241 MPGKGITPKAVIEGPPRRHCPILLRQTSFKALDEPIAFTDAQ----GSHSARFGEIEQRG 296

Query: 300 VALTRKGRALYDALLSRVRDANGA----GNAGADYQARLNAAFNDFPDDLKTMREEGLGF 355
           VALT KGRALYD LL+  RD  GA    GNA A Y   +   F  FPD+   MRE+GL +
Sbjct: 297 VALTPKGRALYDQLLNAARDELGAFPNEGNA-ARYVELMERHFQAFPDNHAQMREQGLAY 355

Query: 356 FRYALTDKGRAANQDALGAKPLHALVDEGWLEAEPITYEDFLPVSAAGIFQSNLGADEQK 415
           FRY  T++G AA   A   + L ALV+   ++ EP+ YEDFLPVSAAGIFQSNLG   Q 
Sbjct: 356 FRYFATEQGLAARGTAAQPRTLEALVEASHIDVEPLVYEDFLPVSAAGIFQSNLGDAAQS 415

Query: 416 SYAANSAQAVFEAALGATVQDEIALYEEAQARSLKEAVPFLSA 458
            YAANS +A FE ALG    DE+ LY E Q RS+ E    L A
Sbjct: 416 HYAANSNRAEFEKALGRRTIDELKLYGETQQRSIDECTKALLA 458