Pairwise Alignments

Query, 432 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

Subject, 458 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

 Score =  283 bits (725), Expect = 6e-81
 Identities = 167/416 (40%), Positives = 244/416 (58%), Gaps = 48/416 (11%)

Query: 62  LLVWIIAGLLLALLAWAWSFKLDEVSTGSGKVVPSSREQMIQSLEGGILVDLKVREGDIV 121
           L +W +    + L+ WA    +DEV+ G GK +PSS+ Q IQ+LEGGI+ ++  +EG IV
Sbjct: 46  LTIWGVILFFVFLIVWASVAPIDEVTRGEGKAIPSSKVQKIQNLEGGIVAEIFAKEGQIV 105

Query: 122 DEGEVLAQLDRTKTESTVQES-ASRVRAALAMSARLTAEVGGTPLAFPPEVSSDA-DLVR 179
           + G+ L +LD T+  S V E+ A R+  AL +  RL+AEV   PL    ++   A +   
Sbjct: 106 EVGQPLLRLDETRFASNVGETEADRLAMALRVE-RLSAEVEDRPLIIDEKLRKAAPNQAA 164

Query: 180 TETALYQSRREQLASSLSGVTQ---------------------ALSLMRRELALTEPLVA 218
           +E +LYQSRR+QL   + G+ Q                     +L L+R+E++++EPLVA
Sbjct: 165 SEESLYQSRRQQLQDEIGGLQQQLVQRQQELREYSSKRTQYANSLELLRKEISMSEPLVA 224

Query: 219 RGAASDVEVLRLKRQ---------------------INEAETKAADLKSQYYVKAREDLA 257
            GA S VEVLRL+R                      I E ++K  + + ++  +A   L 
Sbjct: 225 TGAISQVEVLRLRRAEVENRGQLDSTALAIPRAEAAIREVQSKIEETRGKFRSEALTQLN 284

Query: 258 KANAEIEAQRSVTRGRSDSLTRLTFASPVRGIVKDIAVTTVGGVLPPGGKLMVIVPLDEK 317
           +A  E+    + ++   D + R    SPVRGIVK + V T+GGV+ PG  ++ +VPLD+ 
Sbjct: 285 EARTELNKATATSKALDDRVHRTLVTSPVRGIVKQLLVNTIGGVIQPGSDIIEVVPLDDT 344

Query: 318 LLVEARISPRDVAFIHPGQEAAVKVTAYDYAIFGDLPGKVTTISPDTIQDDVKRDVYYYR 377
           L++EA+I P+D+AF+HPGQEA VK TAYDY I+G L  K+  I  DTI D+ K+  YY  
Sbjct: 345 LVIEAKILPKDIAFLHPGQEATVKFTAYDYTIYGGLKAKLEQIGADTITDEDKKTTYYL- 403

Query: 378 VYIRTDVDHLKNKNGQSFPIVPGMIATVDIRTGSKSVLDYLLKPLNKA-GEALRER 432
           + +RTD  HL   + +   I+PGM+ATVDI TG K+++ YLLKP+ KA  EALRER
Sbjct: 404 IKLRTDRSHL-GTDEKPLLIIPGMVATVDIMTGKKTIMSYLLKPIMKARSEALRER 458