Pairwise Alignments

Query, 384 a.a., Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) from Variovorax sp. SCN45

Subject, 386 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

 Score =  228 bits (581), Expect = 2e-64
 Identities = 143/389 (36%), Positives = 213/389 (54%), Gaps = 20/389 (5%)

Query: 1   MNFELSEEQNAFAQTARDFAQAEFAPHAAQWD-AEAFFPKEAIA---KAGELGFCGLYAP 56
           MNF+LS+EQ+      R F   E  PH    D A+A  P+ A     KA   GF     P
Sbjct: 1   MNFQLSQEQDMLVDAVRSFVAKELLPHEEAVDRADAVSPELAAQIRDKAIAAGFYAFNMP 60

Query: 57  ERIGGLGLPRLDSALVFEEMAAVDPSTTAFITIHNMATWMLGTWATDAVAQQWGEEL--- 113
           E +GG GL  L  AL+  E++ V  +   F+   +                Q G+ L   
Sbjct: 61  EEVGGGGLDYLSQALIERELSKVSWALHVFVARPSKILMA-------CTGSQIGDYLLPC 113

Query: 114 TSGRKLASYCLTEPGAGSDAGSLKTRAELQGAEYVINGGKAFISGAGSTDVLVLMART-- 171
             G+K+  + LTEPGAGSDA ++KTRA   G ++VING K FIS AG  D  ++ A T  
Sbjct: 114 VQGKKVDCFALTEPGAGSDANAIKTRAVRSGDDFVINGSKHFISHAGHADFAIVFAVTDT 173

Query: 172 ---GGAGASGISAFAVPADAPGISYGKKEHKMGWNSQPTRTINFDNVRIPAQNLLGKEGE 228
               G   + +++F V    PG++  +    +      T  + FD+ R+PA  +LG+ G+
Sbjct: 174 YEHNGRQRNAVTSFLVDRGTPGMTIRRGPKCVSNRGYHTYEMFFDDCRVPASKVLGEVGK 233

Query: 229 GFRIAMKGLDGGRINIATCSVGAAQGALDAARRYLHERQQFGKPLASFQALQFKLADMAT 288
           G+ +A   L  GR+ +A   VG AQ ALD + ++  +R+QFG+P+ ++Q + FKLADMAT
Sbjct: 234 GWEVANAWLTAGRVMVAANCVGQAQRALDVSLQWAADRKQFGQPIGTYQGVSFKLADMAT 293

Query: 289 ELVAARQMVRLAASKLDAGHADASTYCAMAKRFATDAGFNVCNDALQLHGGYGYLSEFPL 348
           ++ AA  +    A K+D G +       MAK FA++    V ++A+Q+ GG G + E P+
Sbjct: 294 QIRAAELLTLHTAWKMDQG-SMTDGEAGMAKLFASETLGKVADEAVQIFGGMGLMDEGPV 352

Query: 349 ERLVRDARVHQILEGTNEIMRVIVARKLL 377
           ER+ R+AR+ +I EGT+EI R I+AR+LL
Sbjct: 353 ERIWRNARIERIWEGTSEIQRHIIARELL 381