Pairwise Alignments

Query, 522 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 540 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  207 bits (527), Expect = 8e-58
 Identities = 159/523 (30%), Positives = 240/523 (45%), Gaps = 32/523 (6%)

Query: 9   FLKTHALRRPNHPAYIYSSGAVTWKELDRRVDALVAAFKKKGLAKGDVVAVCVADGPVQI 68
           F++  A    N+PA I+ +    W+E  +R   L +A   +G+ +GD VAV + + P  +
Sbjct: 23  FIERTAAVYGNYPAVIHGAIRRNWQETYQRCRRLASALAGRGIGRGDTVAVMLPNTPTML 82

Query: 69  EVIYAAARLGAIRVGLNYRFAATDIQKLVAHSGARFAIAETGCRNLLDGCSIELG----I 124
           E  +     GA+   LN R  A  I  ++ H  A+  I +     +++G    L     +
Sbjct: 83  EAHFGVPMTGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDREFHAVIEGALALLEHPPLV 142

Query: 125 VDAGDGQGELGEYESMLDFEAPAHSG--------PVAGSDVAQICYTTGSTGNPKGAVWL 176
           VD  D +   G   S LD+EA  + G        P        + YT+G+TGNPKG V+ 
Sbjct: 143 VDVDDPEYGEGRAVSQLDYEALLNEGDPEFAWEWPDDEWQAISLNYTSGTTGNPKGVVYH 202

Query: 177 HRSV-VHAMGFTLLDIGLSEEDVYLHCLPAAGVPSVLATWNVM-LGFTTVVMPRFQADLA 234
           HR   ++A+G   +   +    VYL  LP          W +  L  T V + R      
Sbjct: 203 HRGAYLNALG-NQMTWAMGHRPVYLWTLPMFHCNGWCYPWTITALAGTHVFLRRVDPQKI 261

Query: 235 LDLMERHRCTSTLLIPTMLTAVCEEAERKPRDVSSMRKILYGSASTPPALIRRGGKVFEG 294
           L L+  H+ +     P +L A+    E     +    + +   A+ P  +I  G     G
Sbjct: 262 LTLIREHKVSHLCGAPIVLNALVNMPEAAKAAIEHPVQAMVAGAAPPAKVI--GAVEQMG 319

Query: 295 IEFEQIYGSTEGAG-----GWFTKLSATDHRRALESNDDLLSSCGK--PTIHARVQIRDD 347
           I+    YG TE  G      W  +  A     +LE    + S  G   PT+   +     
Sbjct: 320 IKVTHTYGLTEVYGPVTVCAWHDEWDAL----SLEERARIKSRQGVRYPTLDGLMVADPQ 375

Query: 348 DGHPC--ETGQVGEICVAGDFVMEGYYKEEELTRKTLKDGWLHTGDMGRLDENGYLYLVD 405
              P   +   +GEI + G+ VM+GY K  E T +  + GW HTGD+     +GY+ + D
Sbjct: 376 TLQPVPRDGDTLGEIFMRGNTVMKGYLKNPEATAEAFRGGWFHTGDLAVWHADGYIEIKD 435

Query: 406 RKQFMIITGGYNVYPIEVENVIAAHPDVLETCVFGVPDEKWGEAVHAVIVVRPGTTLHAE 465
           R + +II+GG N+  IEVE+ +  H  VLE  V   PDEKWGE   A + ++PG     E
Sbjct: 436 RLKDIIISGGENISTIEVEDALYKHSAVLEAAVVARPDEKWGETPCAFVALKPGREDTRE 495

Query: 466 -DVKDWCKTRLAQFKRPKSIEFREALMRGATGKIQKRAEQSRA 507
            D+  WC+  LA FK PK++ F E L + +TGKIQK   + RA
Sbjct: 496 ADITSWCREHLAGFKVPKTVVFGE-LPKTSTGKIQKYVLRDRA 537