Pairwise Alignments

Query, 522 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 548 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  212 bits (539), Expect = 3e-59
 Identities = 162/515 (31%), Positives = 232/515 (45%), Gaps = 33/515 (6%)

Query: 9   FLKTHALRRPNHPAYIYSSGAVTWKELDRRVDALVAAFKKKGLAKGDVVAVCVADGPVQI 68
           FLK  A   P   A IY +   ++++L  R  AL +A ++ G+  G+ VA+   + P  +
Sbjct: 25  FLKRAAQVYPQRDAVIYGARRYSYRQLHERSRALASALERVGVQPGERVAILAPNIPEML 84

Query: 69  EVIYAAARLGAIRVGLNYRFAATDIQKLVAHSGARFAIAE-------TGCRNLLDGCSIE 121
           E  Y     GA+ V +N R     I  ++ H  A+  I +            +LD   + 
Sbjct: 85  EAHYGVPGAGAVLVCINIRLEGRSIAFILRHCAAKVLICDREFGAVANQALAMLDAPPLL 144

Query: 122 LGIVDAGDGQGELGEYESMLDFEA------PAH--SGPVAGSDVAQICYTTGSTGNPKGA 173
           +GI    D Q E  +    LD+EA      PA   S P        I YT+G+TG+PKG 
Sbjct: 145 VGI---DDDQAERADLAHDLDYEAFLAQGDPARPLSAPQNEWQSIAINYTSGTTGDPKGV 201

Query: 174 VWLHRSVVHAMGFTLLDIGLSEEDVYLHCLPAAGVPSVLATWNVML-GFTTVVMPRFQAD 232
           V  HR          L   L    VYL  LP         TW V L G T V + + Q D
Sbjct: 202 VLHHRGAYLNACAGALIFQLGPRSVYLWTLPMFHCNGWSHTWAVTLSGGTHVCLRKVQPD 261

Query: 233 LALDLMERHRCTSTLLIPTMLTAV--CEEAERKPRDVSSMRKILYGSASTPPALIRRGGK 290
                +  H  T     P +++ +   E A   P  VS    ++ G A+ P A+I     
Sbjct: 262 AINAAIAEHAVTHLSAAPVVMSMLIHAEHASAPPVPVS----VITGGAAPPSAVI--AAM 315

Query: 291 VFEGIEFEQIYGSTEGAGGWFTKLSATD-HRRALESNDDLLSSCG--KPTIHARVQIRDD 347
              G      YG TE  G     L         LE+    +S  G   P +     +  D
Sbjct: 316 EARGFNITHAYGMTESYGPSTLCLWQPGVDELPLEARAQFMSRQGVAHPLLEEATVLDTD 375

Query: 348 DGHPCETG--QVGEICVAGDFVMEGYYKEEELTRKTLKDGWLHTGDMGRLDENGYLYLVD 405
            G P       +GE+ V G+ VM+GY    E TR  L +GWLHTGD+  L  +GY+ + D
Sbjct: 376 TGRPVPADGLTLGELVVRGNTVMKGYLHNPEATRAALANGWLHTGDLAVLHLDGYVEIKD 435

Query: 406 RKQFMIITGGYNVYPIEVENVIAAHPDVLETCVFGVPDEKWGEAVHAVIVVRPGTTLHAE 465
           R + +II+GG N+  +E+E V+  HP+V+E  V   PD +WGE  HA + +R       +
Sbjct: 436 RAKDIIISGGENISSLEIEEVLYQHPEVVEAAVVARPDSRWGETPHAFVTLRADALASGD 495

Query: 466 DVKDWCKTRLAQFKRPKSIEFREALMRGATGKIQK 500
           D+  WC+ RLA FK P+ +   + L + ATGKIQK
Sbjct: 496 DLVRWCRERLAHFKAPRHVSLVD-LPKTATGKIQK 529