Pairwise Alignments

Query, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 293 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  150 bits (379), Expect = 3e-41
 Identities = 92/293 (31%), Positives = 151/293 (51%), Gaps = 5/293 (1%)

Query: 1   MTEFLQFALAGISVGVIYGAIAVGFNIIYNSSHVVNFAQGEFVMLGAMTCVLLLGAGLPY 60
           M  FL+  + G+  G +Y  +A+GF +IY +S V NFAQG  ++  A+T V L   GLP+
Sbjct: 1   MNFFLETLIGGLLAGTLYSLVAIGFVLIYKASGVFNFAQGAMLLFAALTFVSLHEQGLPF 60

Query: 61  PLAAFLAVAATAVVGLLLYDVAIRPAKNAPVIMLIIITIGASILIRGLARPIFGTGVASL 120
            LA  L V    V  LL+  + +RP  N   I L + T+G S +I GLA+ + G  V +L
Sbjct: 61  ALALALTVLVMIVGALLIERLVLRPLVNRSQITLFMATLGLSFIIEGLAQGLMGAQVRAL 120

Query: 121 PAVVPGASISIGGAVVQPQSLIVVAGTLGAVLLLWLFMRKTLLGKGLIAASSDPMAATLM 180
              +    + +G  ++    L+    +   V +L L   KT +G  L A + D  AA  +
Sbjct: 121 DLGIEDVPLFVGELMISQFDLVASGVSALLVAVLALLFNKTRIGVALRAVADDTRAALSL 180

Query: 181 GIRVSNIVRLSFLISASLGAVSGILIAPIALANYEMGTLLALKGFAAAILGGMGSIPGAV 240
           GI ++ I ++ + ++  +G V+G+L        + + +L+ LK     I+GG  SI GA+
Sbjct: 181 GINLNRIWQIVWAVAGMVGLVAGLLWGARQGVQFSL-SLVVLKALPVLIIGGFTSIGGAI 239

Query: 241 LGGLLVGLSEAMSAGY----ISSDYKDATAFVVIMLALFFFPNGLVGSGEVTR 289
           +GGL+VG +E ++  Y    I        A+ + ++ L+  P GL G   + R
Sbjct: 240 VGGLIVGAAENLAEAYIGPLIGGGITPWFAYFLALIFLYIRPAGLFGDRAIER 292