Pairwise Alignments

Query, 275 a.a., ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

Subject, 260 a.a., putative Nitrate ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  145 bits (367), Expect = 7e-40
 Identities = 96/255 (37%), Positives = 132/255 (51%), Gaps = 4/255 (1%)

Query: 19  IVRGAGRWAERGIGIVLFLLLWEALPR----LGIVSDAYLSPPSAVLAAIGQLLDNGLLW 74
           + R   RW  R   ++  LL W+        LG+++  Y+  P AVL A  QLL +  L 
Sbjct: 1   MTRNLKRWPVRLASLLACLLFWQVAANVKMDLGLLTFTYVPTPKAVLDAAWQLLTSSTLL 60

Query: 75  KHVAASLQRSLWGLVLASAAGVVLGLLIGGFRRLAAIVDPLLQLFRQTSAFALFPVFILF 134
            H+ +SL R   G   A+  GV LGLLIG  +     + P L++ R   A A  P+ IL 
Sbjct: 61  AHLGSSLARVFAGYATAALVGVALGLLIGRSKWAEDTLLPPLEVLRPIPAVAWIPLAILM 120

Query: 135 LGIGELSKVAIIFWASFWPVLLSTVSGVKQVDRLLVNSALSMGASRRFIFFKVVLPASLP 194
               ELS V I F  + +P+LL+TV GV+ VD  LV SA S+GA R  I  +VVLP +LP
Sbjct: 121 FPSSELSMVFITFTGALFPILLNTVHGVEAVDPRLVASARSLGAGRWAILREVVLPGALP 180

Query: 195 SIFTGVRLAGAYSITALVAAEMIGAHSGLGFLTLNSQETFQIPTMYAGILMLAVLGLLLN 254
           SI TG+ +    S   LV AEMI    G+G+ T  S      P +  G+L++ VLG+  +
Sbjct: 181 SIVTGLAIGMGTSWFCLVTAEMISGQFGIGYYTWESYTLQNYPDIVVGMLLIGVLGMGSS 240

Query: 255 YLLALLERHLLRWRR 269
            L+  L      W R
Sbjct: 241 ALVKRLGALATPWYR 255