Pairwise Alignments

Query, 543 a.a., Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2) from Variovorax sp. SCN45

Subject, 535 a.a., dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor from Escherichia coli BL21

 Score =  646 bits (1667), Expect = 0.0
 Identities = 312/524 (59%), Positives = 398/524 (75%), Gaps = 5/524 (0%)

Query: 21  AIAALTLACGAVSAKTLVYCSEGSPENFYPGMNTTGTSFDVTT-QVYNTIVEFERGGTKV 79
           ++ A+T+A  +V AKTLVYCSEGSPE F P + T+GT++D ++  +YN +VEF+ G T+V
Sbjct: 16  SLVAMTVAA-SVQAKTLVYCSEGSPEGFNPQLFTSGTTYDASSVPLYNRLVEFKIGTTEV 74

Query: 80  VPGLAEKWDISADGTVYTFHLRKGVKWHTTSKSFKPTRDFNADDFIFMLERQWKESDPFF 139
           +PGLAEKW++S DG  YTFHLRKGVKWH  +K FKPTR+ NADD +F  +RQ    +P+ 
Sbjct: 75  IPGLAEKWEVSEDGKTYTFHLRKGVKWHD-NKEFKPTRELNADDVVFSFDRQKNAQNPYH 133

Query: 140 KVTSQNHSYFNDMGMPKLLKTVDRIDDYTVKIVLNQPEAPFLANLAMQYAGIQSKEYAIA 199
           KV+  ++ YF  MG+P+L+  V ++DD TV+ VL +PEAPFLA+LAM +A I SKEYA A
Sbjct: 134 KVSGGSYEYFEGMGLPELISEVKKVDDNTVQFVLTRPEAPFLADLAMDFASILSKEYADA 193

Query: 200 MLKAGTPEKVDQDPIGTGPFYLVQYQKDAVIRFKAFPQYWGGKAKIDDLVFAITPDASVR 259
           M+KAGTPEK+D +PIGTGPF L QYQKD+ IR+KAF  YWG K +ID LVF+ITPDASVR
Sbjct: 194 MMKAGTPEKLDLNPIGTGPFQLQQYQKDSRIRYKAFDGYWGTKPQIDTLVFSITPDASVR 253

Query: 260 WAKLQKGECHVMPYPNPADLDAIRKDPNVQVLEQPGLNVGYLSYNTTKKPFDDVRVRKAI 319
           +AKLQK EC VMPYPNPAD+  +++D ++ ++E PGLNVGYLSYN  KKP DDV+VR+A+
Sbjct: 254 YAKLQKNECQVMPYPNPADIARMKQDKSINLMEMPGLNVGYLSYNVQKKPLDDVKVRQAL 313

Query: 320 NMAINKKAIIDGVYLTTGVAAKNPIPPTMWSYNDAVKDDPYDPEAAKKLLAQAGYPDGFS 379
             A+NK AII  VY   GV+AKN IPPTMW YND V+D  YDPE AK LL +AG   GFS
Sbjct: 314 TYAVNKDAIIKAVYQGAGVSAKNLIPPTMWGYNDDVQDYTYDPEKAKALLKEAGLEKGFS 373

Query: 380 TDLWAMPVQRPYNPNAKRIAELMQADLAKINVKAEIKSFEWGEYRKRLQAGEHQMGMLGW 439
            DLWAMPVQRPYNPNA+R+AE++QAD AK+ V+A+I ++EWGEY KR + GEHQ  M+GW
Sbjct: 374 IDLWAMPVQRPYNPNARRMAEMIQADWAKVGVQAKIVTYEWGEYLKRAKDGEHQTVMMGW 433

Query: 440 TGDNGDPDNFLYTLLGCASAKSASGSNISKFCYQPYEDLVVKAKSTVKQADRDALYKKAQ 499
           TGDNGDPDNF  TL  CA+  S  GSN SK+CY+P+EDL+  A++T     R  LYK+AQ
Sbjct: 434 TGDNGDPDNFFATLFSCAA--SEQGSNYSKWCYKPFEDLIQPARATDDHNKRVELYKQAQ 491

Query: 500 VIFKEQAPWFTIAHAVQLKPVRKEVVDFKLSPFGRHTFYGVDIK 543
           V+  +QAP   IAH+   +PVRKEV  + + P G+H F  V I+
Sbjct: 492 VVMHDQAPALIIAHSTVFEPVRKEVKGYVVDPLGKHHFENVSIE 535