Pairwise Alignments

Query, 301 a.a., Dipeptide ABC transporter, permease protein DppC (TC 3.A.1.5.2) from Variovorax sp. SCN45

Subject, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  244 bits (624), Expect = 1e-69
 Identities = 126/277 (45%), Positives = 182/277 (65%), Gaps = 6/277 (2%)

Query: 24  WAAFSANRGAVIGLVTIILLMLVAMFAPWIAPHAPNETNSAVFLQPPAWQQGGSTSYLLG 83
           W A   NR + IG+  +++++LVA+FAP IAP+ P + N A  L+PP      S  + LG
Sbjct: 16  WQALFQNRLSWIGIGLLVMIVLVALFAPLIAPYDPLQQNIAYRLEPP------SAEFWLG 69

Query: 84  TDAIGRDILSRLMYGARLSLSIGVAVVALSVVVGVVLGLIAGFFRGVLEIAIMRLMDIVL 143
           TD  GRD+LSRL+YG R+SL +G   V +++VVG  LG+IAG+  G+ +  I   +D++L
Sbjct: 70  TDTYGRDVLSRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLL 129

Query: 144 TLPSLLLAIVIVAILGPGLVNAMLAVAIVVLPHYVRITRAAVIAEVSRDYVTAARVSGAG 203
           + P+LLL +++ A+LG  L N ++A+AI  +  +VRI RA  IA   RD+V A R  G G
Sbjct: 130 SFPTLLLGLMVAAMLGASLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYG 189

Query: 204 TLRLMFREVLPNCAAPLIVQASLGISTAILDAAALGFLGLGAQPPSPEWGTMLADAREFV 263
             RLM   +LPN  + ++V  +L ++TAI   A+L F+GLG  PP+P WG+M+ +  E +
Sbjct: 190 PGRLMTVHILPNMISEVLVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENI 249

Query: 264 LRAWWVVTFPGLAILMAVLAFNLLGDGLRDALDPKLK 300
           L AWW+  FP LAIL+ VLA +LLGD LRDA DPK +
Sbjct: 250 LDAWWLTVFPSLAILLTVLALSLLGDALRDANDPKTR 286