Pairwise Alignments

Query, 301 a.a., Dipeptide ABC transporter, permease protein DppC (TC 3.A.1.5.2) from Variovorax sp. SCN45

Subject, 297 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  238 bits (607), Expect = 1e-67
 Identities = 123/265 (46%), Positives = 170/265 (64%), Gaps = 6/265 (2%)

Query: 34  VIGLVTIILLMLVAMFAPWIAPHAPNETNSAVFLQPPAWQQGGSTSYLLGTDAIGRDILS 93
           ++G V +I ++ + + +PWI PH PN  +    LQ P      S  +  GTD +GRD+ S
Sbjct: 34  IVGGVIMIAMLFLMVASPWIVPHDPNALDLTARLQAP------SAQHWFGTDEVGRDLFS 87

Query: 94  RLMYGARLSLSIGVAVVALSVVVGVVLGLIAGFFRGVLEIAIMRLMDIVLTLPSLLLAIV 153
           R++ G++ S++ G+AVV ++  +G +LG ++G   G  +  IMR+MDI+L++PSL+L + 
Sbjct: 88  RVLTGSQQSITAGLAVVVIAGGIGSLLGCLSGVLGGRGDAIIMRVMDIMLSIPSLVLTMA 147

Query: 154 IVAILGPGLVNAMLAVAIVVLPHYVRITRAAVIAEVSRDYVTAARVSGAGTLRLMFREVL 213
           + A LGP L NAMLA+AIV +P YVR+ R   +      YV AAR  GA    L+   +L
Sbjct: 148 LAAALGPSLFNAMLAIAIVRIPFYVRLARGQTLVVRQFTYVQAARTFGASRWHLIRWHIL 207

Query: 214 PNCAAPLIVQASLGISTAILDAAALGFLGLGAQPPSPEWGTMLADAREFVLRAWWVVTFP 273
            N   PLIVQASL I +AIL AA LGF+GLGAQ P+ EWG M+A  R +VL  WW   FP
Sbjct: 208 RNALPPLIVQASLDIGSAILMAATLGFIGLGAQQPTAEWGAMVAVGRNYVLDQWWYCAFP 267

Query: 274 GLAILMAVLAFNLLGDGLRDALDPK 298
           G AIL+  + FNL GDG+RD LDPK
Sbjct: 268 GAAILITAVGFNLFGDGIRDLLDPK 292