Pairwise Alignments

Query, 301 a.a., Dipeptide ABC transporter, permease protein DppC (TC 3.A.1.5.2) from Variovorax sp. SCN45

Subject, 293 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  222 bits (565), Expect = 9e-63
 Identities = 113/273 (41%), Positives = 171/273 (62%), Gaps = 3/273 (1%)

Query: 24  WAAFSANRGAVIGLVTIILLMLVAMFAPWIAPHAPNETNSAVFLQPPAWQQGGSTSYLLG 83
           W  FS N  AVIG + ++ ++++A+FAPW+ P+ P    + V  +  A        +  G
Sbjct: 21  WYRFSRNPAAVIGSLILLSVLVLAVFAPWLTPY-PKHIGAVVDFR--ARHMPPDLEHWFG 77

Query: 84  TDAIGRDILSRLMYGARLSLSIGVAVVALSVVVGVVLGLIAGFFRGVLEIAIMRLMDIVL 143
           TD  GRDI SR ++G R+SL + + V+ +SV VG VLGL+AG+F G  E  I  L +++L
Sbjct: 78  TDKAGRDIFSRTIFGLRVSLLLVIGVLGISVPVGTVLGLVAGYFGGWTEKLISGLTNVML 137

Query: 144 TLPSLLLAIVIVAILGPGLVNAMLAVAIVVLPHYVRITRAAVIAEVSRDYVTAARVSGAG 203
            +P L++A+ +  +L P L NAM+A+ ++    + R+  +   +  S DY+ AAR++GAG
Sbjct: 138 AMPPLVMALAVSNLLEPTLTNAMIAITLLWWTWHARLIYSVSKSIASEDYIEAARLAGAG 197

Query: 204 TLRLMFREVLPNCAAPLIVQASLGISTAILDAAALGFLGLGAQPPSPEWGTMLADAREFV 263
            L ++FRE+LPNC + + V+ +L  +  IL  A L FLG G +PP+P+ G+M+AD R+F+
Sbjct: 198 PLHILFREILPNCVSVISVKTTLDAAFVILFGATLSFLGFGVKPPTPDLGSMVADGRQFM 257

Query: 264 LRAWWVVTFPGLAILMAVLAFNLLGDGLRDALD 296
              WW V  PG A+L   L FNLLGDGLRD  D
Sbjct: 258 PDFWWEVLCPGAAVLYVTLGFNLLGDGLRDMFD 290