Pairwise Alignments

Query, 334 a.a., Dipeptide ABC transporter, permease protein DppB (TC 3.A.1.5.2) from Variovorax sp. SCN45

Subject, 306 a.a., ABC transporter permease subunit from Dickeya dianthicola ME23

 Score =  225 bits (574), Expect = 1e-63
 Identities = 136/333 (40%), Positives = 194/333 (58%), Gaps = 29/333 (8%)

Query: 1   MFRFILTRVSLLVPTFIGMTLLAFFLIRLVPGDPIETMAGERGIDPARHAELRTAYGFDK 60
           MF +I+ R+  ++P  + ++LL F  I+L+PGDP    AG      A  A  R   G + 
Sbjct: 1   MFVYIVRRLLEMIPVLLVISLLVFGFIKLLPGDPARIYAGPDAPIEAVEAA-RERLGLND 59

Query: 61  PVIVQYGIYIGRVLHGDLGKSIITQDTVMSEFLALFPATVELAVCAILFALLLGLPAGIL 120
           P+  QY  ++  ++HGDLG +  TQ  V+S     F  T+ LA+    +++LLGL  G+ 
Sbjct: 60  PLPQQYLNWLDGLVHGDLGITYRTQQPVLSVIQKSFMPTLWLALAGFAWSVLLGLLIGVF 119

Query: 121 AAVRRNSIFDHGVMATSLTGYSMPIFWWGLLLILFFSVQLGWTPVSGRIAVQYYIEPETG 180
           AA++R    D  +M+ ++ G SMP FW GLLLI F ++  G   VSG      Y +P   
Sbjct: 120 AALKRGKWQDWSLMSLAVGGISMPPFWLGLLLIQFVAMPFGVFSVSG------YNKPAD- 172

Query: 181 FLLIDSLRAGDTGAFWSALHHLILPAVVLGTVPLAVIARMTRSAMLEVLGEDYIRTARAK 240
                                +ILPA+ LG    AV+AR TRSA LEV  EDY+RTARAK
Sbjct: 173 ---------------------IILPALTLGASVAAVMARFTRSAFLEVTQEDYVRTARAK 211

Query: 241 GLSRLRVVGLHALRNALIPVVTVIGLQVGVLFTGAILTETIFSWPGVGKWLIEAIGRRDY 300
           GL +  +V  H +RNALIPV+T++GLQ G L  G+I+ E++F+WPG+G  LIE+I  +D 
Sbjct: 212 GLRQRLIVWKHVMRNALIPVITMLGLQFGFLLGGSIVVESVFNWPGLGWLLIESIKTQDQ 271

Query: 301 PVLQGGMLLLGGIVMLVNLLVDVAYGVINPRIR 333
           PV+Q  ++L     +L+NLLVD+ Y V+NP IR
Sbjct: 272 PVIQALVMLFVFEFILINLLVDLLYAVVNPAIR 304