Pairwise Alignments

Query, 559 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

 Score =  219 bits (559), Expect = 2e-61
 Identities = 150/523 (28%), Positives = 252/523 (48%), Gaps = 30/523 (5%)

Query: 47  GKDISYGETDKQSKAFAAYLQGLGLVKGDRVAAMMPNCPQYPIAVAAILRAGLILVNVNP 106
           G   S+ +  +Q + +A  L  LG+  GDRV    PNC Q+ I   A  + G ILVN+NP
Sbjct: 43  GLRYSWRQLAEQVEIYARALIALGVNTGDRVGIWSPNCAQWCILQLASAKVGAILVNINP 102

Query: 107 LYTPRELEHQLKDSGAKAIIIMENFGTTLQQCIASTPIKHIVLASMGDRLGFLKGALVNY 166
            Y   ELE+ L+ SG + ++  E F T+    +    +  +  A+ G+        L + 
Sbjct: 103 AYRVGELEYVLRQSGCRWLVCAEAFKTSDYHTMVQELVPELASAAPGE--------LASE 154

Query: 167 VVRNVKKLVPHFSLP--GAVRFNDALDKGASGSVKPV-----AIGPDDVAVLQYTGGTTG 219
            +  ++ ++   + P  G + ++   ++    SV+       ++  D    +QYT GTTG
Sbjct: 155 CLPELRGVISLAANPPAGFLPWHAFAERAGQTSVEACTARQQSLQFDQPVNIQYTSGTTG 214

Query: 220 VSKGAVLLHRNVIAN-VLQSEAWNEPAMAKVPANEQPTGVCALPLYHIFAFTVGMMLSMR 278
             KGA L H N++ N  +  E+    A  ++        V  +PLYH F   +  +  + 
Sbjct: 215 APKGATLSHYNILNNGFMVGESLGLTARDRM--------VIPVPLYHCFGMVMANLGCIT 266

Query: 279 TGGKLILIPNPRDIPAVLKELSKHTIHSFPAVNTLFNGLANHPDFNTVNWKNLKISVGGG 338
            G  +I   +  D    L+ +++        V T+F  + +HP    ++   L+  +  G
Sbjct: 267 HGSTMIYPNDAFDAELTLRAVAEERATILYGVPTMFIAMLDHPSRAHMDLSTLRSGIMAG 326

Query: 339 MAVQAAVAKLWLEKTGCPICE-GYGLSETSP-STTCNPTNSTAY-TGTIGLPLPGTWLKL 395
                 V +  +++      +  YG++ETSP S    P +       T+G   P    KL
Sbjct: 327 ATCPIEVMRRVIDQMHMAEVQIAYGMTETSPVSLQTGPDDDLELRVTTVGRTQPQLENKL 386

Query: 396 LDDEGNEVPLGERGEIAIKGPQVMAGYWQRPDETAKVMTPDGYFKSGDIGVVDERGYFKV 455
           +D +G  VP GE GE+  +G  VM GYW  P  TA  + P G+  SGD+ V+DE+GY ++
Sbjct: 387 VDADGCIVPRGEIGELCTRGYSVMLGYWDNPQATADAIDPAGWMHSGDLAVMDEQGYVRI 446

Query: 456 VDRKKDMILVSGFNVYPNEVEDVVALIPGVLECAAVGVPDEKTGEAVKLVIVKKDP--SL 513
           V R KDMI+  G N+YP E+E+     P V +   +G+P  + GE + +  +K  P  S 
Sbjct: 447 VGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEI-VAWIKLHPGHSA 505

Query: 514 TEAQVREYCRANLTGYKQPRIVEFRTEMPKTPVGKILRRELRD 556
           T  +++ +C+A +  +K PR + F  E P T  GK+ +  +R+
Sbjct: 506 TVEELQGWCKARIAHFKVPRYIRFVDEYPMTVTGKVQKFRMRE 548