Pairwise Alignments

Query, 515 a.a., Transcriptional regulator, IclR family from Variovorax sp. SCN45

Subject, 291 a.a., transcription regulatory protein (pca regulon) from Pseudomonas putida KT2440

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 66/244 (27%), Positives = 118/244 (48%), Gaps = 4/244 (1%)

Query: 1   LEKALDVLEAVGAAPEGLSQTELADRLAIPRTTVYRLLATLVTRGLLRRDQLRKVYCLGF 60
           L + L V++A       L+  +++ R  IPR  V R L TL+  G    D   + Y L  
Sbjct: 48  LARGLAVIQAFQERKRHLTIAQISHRTEIPRAAVRRCLHTLIKLGYATTDG--RTYSLLP 105

Query: 61  RCFEMARQAYAMPDLVAAAAIELRTLRDLTGETSYLAALDGREVISLERCDGAHSRRS-Q 119
           +   +     +   L  +A   L  + D   E + +A L+G +++ + R        S  
Sbjct: 106 KVLTLGHAYLSSTPLAISAQPYLDRISDQLHEAANMATLEGDDILYIARSATVERLISVD 165

Query: 120 AALGQRKPIHCTSQGKAILSVLDESAREALIRELNLKPLTQHTITDRRRLQAELKVTAAR 179
            ++G R P +CTS G+ +L+ +D+++    +   +LK  T  T+ D   L A ++   A+
Sbjct: 166 LSVGGRLPAYCTSMGRILLAAMDDTSLREYLERADLKARTSRTLNDPESLFACIQQVRAQ 225

Query: 180 GYAIDDEEIVLGVRCVGAPIVDTNGRVRGAISVAGPAYRLTPDRL-QLLGPELADAARRV 238
           G+ + D+E+  G+R +  P+ D +G+V  A++V+    R+T   L Q   P L  A+R +
Sbjct: 226 GWCVVDQELEQGLRSIAVPVYDASGQVLAALNVSTHVGRVTRSELEQRFLPILLAASRDL 285

Query: 239 GAQL 242
             QL
Sbjct: 286 CHQL 289