Pairwise Alignments

Query, 616 a.a., Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1) from Variovorax sp. SCN45

Subject, 959 a.a., Ribonucleoside-diphosphate reductase subunit alpha from Pseudomonas putida KT2440

 Score =  150 bits (380), Expect = 2e-40
 Identities = 166/636 (26%), Positives = 257/636 (40%), Gaps = 81/636 (12%)

Query: 44  RVARALAQAEKPGEREAWEARFLQALRDGFVPAGRIQSAAGTALTATLINCFVQPVGDSI 103
           RVA  LA  EK  E  A E   L +  D       + +A    L   L +C++  V D +
Sbjct: 325 RVAMGLALEEKDKEARAIEFYNLLSSFDYMASTPTLFNAG--TLRPQLSSCYLTTVPDDL 382

Query: 104 TGDDEGYPGIYVALAEAAETMRMGGGVGYDFSRIRPHGAWVAGTRSSASGPVPFMRVFDC 163
           +G       IY A+ + A   +  GG+G D++ +R  G+++ GT   + G VPF++V + 
Sbjct: 383 SG-------IYHAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVND 435

Query: 164 SCRTVESAGARRGAQMGVLRCDHPDIEAFMGAK-----DDGELSNFNLSVGLTDAFMLAV 218
           +   V   G R+GA    L   H DIE F+  +     D     + N +  + D FM  V
Sbjct: 436 TAVAVNQGGKRKGAVCAYLETWHLDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRV 495

Query: 219 IDDREIELVHCAEPGPR---IGSAQEHRRD--------DGLWVYARRPARALWDRIMRSA 267
            DD +  L   +E        G A E R +        + + V+    A+ LW +++   
Sbjct: 496 FDDGKWTLFSPSEVPDLHDLTGKAFEERYEYYEALTEYNKIKVFKTVQAKDLWRKMLSML 555

Query: 268 YAHGEPGVLFLDRINADNNLSSCETLAATNPCGEQPL----PPYGSCCLGSIDLTRFVKD 323
           +  G P + F D  N  +       + ++N C E  L         C LGSI+L   + D
Sbjct: 556 FETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHIVD 615

Query: 324 PFDPGARFDEKNFSRLAGLAVRMLDNVLDITAWPLERQGREALLKRRIGLGFTGLGDALV 383
                 + D     R    AVRMLDNV+DI  + + +        R +GLG  G  DAL 
Sbjct: 616 -----GKLDTTKLQRTVNTAVRMLDNVIDINYYSVPQARNSNFKHRPVGLGIMGFQDALY 670

Query: 384 MLNLRYDAQPGRAAARRIARLLRDAAYGASCALARERGAFPLFDAGLYL----------- 432
           + ++ Y +      A +    +   A  ASC LA ERGA+  F   L+            
Sbjct: 671 LQHIPYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFQGSLWSKGILPLDSQQI 730

Query: 433 -----GHGTFASRLPE-----PMKTRIRAYGMRNSHLLSVAPTGTISLAFSDNASNGIEP 482
                G       L E     P++ R++  G+RNS+++++APT TI  A     S  IEP
Sbjct: 731 LIEARGQKYIDVNLEETLDWAPVRARVQK-GIRNSNIMAIAPTATI--ANITGVSQSIEP 787

Query: 483 AFAWSFVRRKRLPEGGT-REYEVED------------HALRLY----RQRRGERAALGPA 525
            +   +V+     E      Y V D            + L+ Y    +Q       L   
Sbjct: 788 TYQNLYVKSNLSGEFTVINPYLVRDLKARDLWDSVMINDLKYYDGSVQQIERIPQELKDL 847

Query: 526 FVTALEMSPSAHVEMVAAVAPYVDAAISKTVNVPSDCAYEDFKELYMQAWQSGLKG---L 582
           + TA E+     V+  +    ++D A S  + + +  + +     Y  AW  GLK    L
Sbjct: 848 YATAFEVETKWIVDAASRRQKWIDQAQSLNLYI-AGASGKKLDVTYRMAWYRGLKTTYYL 906

Query: 583 AAYRPNPLRGAVLKAPARPACS--GRAAPVAPVAPA 616
            A        + +      A S  G +APV    PA
Sbjct: 907 RALAATSTEKSTINTGKLNAVSSGGDSAPVQAAGPA 942