Pairwise Alignments

Query, 804 a.a., DNA polymerase II (EC 2.7.7.7) from Variovorax sp. SCN45

Subject, 786 a.a., DNA polymerase II from Pseudomonas putida KT2440

 Score =  889 bits (2298), Expect = 0.0
 Identities = 437/785 (55%), Positives = 563/785 (71%), Gaps = 4/785 (0%)

Query: 21  QGFILTRHWRDASSGTEIEYWLATDEGPRKAVLRSQTSVAFVESRHRPALEAQLAAMPGM 80
           QGF+LTRHW D   GT +E+WLATD GPR   L +Q SVAF+           LA   G 
Sbjct: 5   QGFVLTRHWHDTPEGTCVEFWLATDAGPRLLRLAAQESVAFIPQAQAEHARVLLANETGT 64

Query: 81  QVRELELKTFNCQPVVGVYAKHYRQLGRLTRALQPQGVPVLEADVRPHDRYLMERFITAG 140
           +++ L LK F  +P++G+Y + +RQL +L + L+  G+ V EAD+RP +RYLMERFITA 
Sbjct: 65  KLKPLRLKDFEHRPMLGLYTRQHRQLMQLEQRLRTAGIDVFEADIRPPERYLMERFITAP 124

Query: 141 VTVEEGRADGATIV-DCRLKPAPEFRPVLKMVSLDIETSQDEALYSIALDGLQDRVVFML 199
           V    G+ D   +  D +LKP P +RP L++VSLDIETS+   LYSIAL+G   R V+ML
Sbjct: 125 VQFT-GQPDAQGVYRDAQLKPQPGYRPALRLVSLDIETSERGELYSIALEGCGQRQVYML 183

Query: 200 GEAPPGPGEPMDFSLVYCPTRKAMVESLNDWFERNDPDVVIGWNVIQFDLRVLQKTANDC 259
           G A  G    +DF L YC  R A++  LN W  R+DPD +IGWN++QFDLR+L + A   
Sbjct: 184 GPAN-GDASGLDFDLEYCADRAALITRLNQWMARHDPDAIIGWNLVQFDLRLLHEHAKSL 242

Query: 260 GMQLLLGRERRPIEWRTHPGKQGYLFAPTPGRVIIDGIDALKAAMWSFPSFSLETVSQAL 319
            + L LGR    +  R+H G  G++FA  PGR++IDGI+AL++A WSF SFSLE V+Q L
Sbjct: 243 QVPLALGRNGAVMTLRSHAGG-GHVFADAPGRLLIDGIEALRSATWSFASFSLENVAQTL 301

Query: 320 LGEGKAIGDEYDKMAEIERRYQEDKPALALYNIRDCELVLRIFDKAKLLQFVMERAQTTG 379
           LGEGKAI   Y +M EI RR+ EDKPALA YN++DCELV RIF   +LL F++ERA  TG
Sbjct: 302 LGEGKAIDTPYQRMDEINRRFAEDKPALARYNLKDCELVTRIFAHTRLLDFLLERASVTG 361

Query: 380 LQADHFGGSIAAFSHHYLPRMHRLGYVAPNVGEIASKAFPGGYVMDSKPGFYDSVVVLDY 439
           L  D  GGS+AAF H Y+P+MHRLG+VAP++G    +A PGG+VMDS+PG YDSV+VLDY
Sbjct: 362 LAVDRSGGSVAAFCHLYIPQMHRLGFVAPSLGSRPDEASPGGFVMDSRPGLYDSVLVLDY 421

Query: 440 KSLYPSIIRTFLVDPVGLVEGTHAGDPAMVVKGPQGTVFSRERHCLPEIVTTLWRARDEA 499
           KSLYPSIIRTFL+DPVGL+EG    D A  V+G +G  FSR +HCLP IV  +W+ R+ A
Sbjct: 422 KSLYPSIIRTFLIDPVGLIEGLRQPDDAHSVEGFRGGRFSRTQHCLPAIVERVWQGREAA 481

Query: 500 KRVGNEPLSQALKLLMNSFAGVLGAADCRFFNPKLVSAVTLRGHEMMKLTREFVQSRGYE 559
           KR GN PLSQALK++MN+F GVLG++ CRFF+P+L S++T+RGH++M+ TR  +++ GY+
Sbjct: 482 KREGNAPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRSLIEACGYD 541

Query: 560 VIYGDTDSIFVWLKRTHTNEEAHAVAANLVRDINDWWTGSLRDEQGLDNFLEIEFDTHYR 619
           VIYGDTDS FVWLK  H  E+A  +   LV  +N WW   L +   L + LE++F+ HYR
Sbjct: 542 VIYGDTDSTFVWLKGAHAEEDAARIGRELVAKVNQWWQAHLHETMNLHSALELQFEVHYR 601

Query: 620 KFFMPTIRGSDVGSKKRYAGLSVDAKGKEEMVYRGLEMARSDWTPLARQFQEGLLSRIFQ 679
           +F MPTIRG+D GSKKRYAGL   A G EEMVY+GLE  R+DW+PLARQFQ+ L  R+F+
Sbjct: 602 RFLMPTIRGTDEGSKKRYAGLVQRADGAEEMVYKGLESVRTDWSPLARQFQQELYGRVFR 661

Query: 680 GEPYKEFVSDYAQSTLAGEKDDLLIYRKRLRHRLDAYLVNVPPQVRAARIADEYNARIGR 739
            EPY+++V +Y + TLAGE+D+LL+YRKRLR  L  Y  NVPP VRAAR+AD+YN R+ R
Sbjct: 662 SEPYRDYVREYVRRTLAGEQDELLVYRKRLRRPLADYQRNVPPHVRAARLADDYNKRLQR 721

Query: 740 PMQYQSGGWIRYVMTRNGPEPLETRHSRIDYEHYLSKQLQPIADAILQPVGESFTALTTA 799
           P+QYQ GGWI YV+T  GPEPLE   + IDY+HY+S+QL P+ADAIL  VG+ F  LT  
Sbjct: 722 PLQYQRGGWISYVITTAGPEPLENLQAPIDYDHYISRQLLPVADAILPFVGDDFARLTDH 781

Query: 800 QQHLF 804
           Q  LF
Sbjct: 782 QLLLF 786