Pairwise Alignments

Query, 264 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 254 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score =  129 bits (324), Expect = 6e-35
 Identities = 75/247 (30%), Positives = 123/247 (49%), Gaps = 1/247 (0%)

Query: 16  WGVVAAQVAAALALLAAWEGAVRAGAVSALYLPAPSAIFESFVPMLMRGQLLHHTGVTLA 75
           W + A Q  A   + A WE A R G      LP  S + +  + +L  G ++    +T +
Sbjct: 8   WRIRAVQFGAVALVAALWEFAPRLGLADPTLLPPFSEVLKQLITLLSEGSVMKDLAITAS 67

Query: 76  EFAVGYAAAVVAGIGFGVLLVLTPAAERFAQPFVAALMSVPKVAIVPLLALWLGIGFSHK 135
           E A+ +A     G+G G+LL       R  +PF   L SVPK   +P   L  GIGF  K
Sbjct: 68  EVALAFAIVAPLGVGCGLLLAENDYIGRVFKPFFYFLASVPKSVFLPAFILLFGIGFGQK 127

Query: 136 VAIVFLFSVFQILYSTIAGIKQTRREHLKVARAFRASTLQTVWKVILPSAVPTIFAALRV 195
           VA     ++F ++ ST+A +     E +K+ARA+ AS  +   ++  PS +P I   +R+
Sbjct: 128 VAFGVFQAIFVLVISTVAAVASVEPELVKLARAYGASRARIYAEIYWPSMLPFIVEGMRL 187

Query: 196 SASVGLVGALFAEMLSSKEGLGNLITRSTASLDTAETFALIVLVTVLAVAMIAALDLLER 255
                + G +FAEM  ++ G+G  I     +    + +A ++LV++L++ +  AL   ER
Sbjct: 188 GVIFSITGVVFAEMAVARAGMGARIATWGQTFQMPDLYAGVLLVSLLSITVNEALRAYER 247

Query: 256 LLFLRWR 262
            +  +WR
Sbjct: 248 KVG-KWR 253