Pairwise Alignments

Query, 341 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

Subject, 321 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score = 53.9 bits (128), Expect = 5e-12
 Identities = 66/272 (24%), Positives = 99/272 (36%), Gaps = 22/272 (8%)

Query: 80  EFINTQDAVSGLASGDIDIADWNTTGAIVAAGKGVPLTIVASMFRHVGPFYLVGAPD--V 137
           EF         L +G ID         +     G P+  +A          L+  P+  +
Sbjct: 58  EFPAAAPLAEALNAGAIDAGIIGDAPLLFVLASGAPVKAIAVDKSDPYGTALLVRPEAPL 117

Query: 138 ASVSALKGKTVGAAAFGTGLDVYARTILSKEGVPLDSVSFVANGVNAAALATVENGSVSA 197
            S + LKGK +       G  + A   L++ G+    V F   G   A +A + NGSV A
Sbjct: 118 RSAAELKGKRIATGRGSIGHHL-ALKALAQAGLTEKDVEFRFLGPVDAKIA-LANGSVDA 175

Query: 198 TIIHEPFASLAEASGKGKVLAAGYDYLPRFHTGVIVANNKFIASSPRLLEK--------- 248
               EP+ +LAE SG+G+VL  G           +   N F+A++ + LE+         
Sbjct: 176 WSTWEPYTALAELSGQGRVLVNGRG---------LSTGNSFLAATDKALEEPGRRAALQD 226

Query: 249 FLRAYFRSNEYAKAHLDEYKAFYAKRLSVDPKVVDAAVRRELPIWANDPKVSLDEVQETQ 308
           +L     +  +A  HLD Y    A  +    +       R    W      ++ E Q+T 
Sbjct: 227 YLNRLAAAQVWANQHLDTYSKTLAAIIGFPVEAARLQFERRQLRWQVIDTQTVTEQQDTA 286

Query: 309 QVQLALGFQKEIYDAAKFVNLAFVPKGAASPA 340
                 G   E  D A      F    AA  A
Sbjct: 287 DFYHTHGLMTERLDVAPTFATGFTLPAAAKLA 318